CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
peroxisome 1
mitochondrion 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71268	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	37.76	83.89
Bra018392.1-P	Field mustard	cytosol	88.52	78.76
PGSC0003DMT400066411	Potato	nucleus	29.0	65.75
AT2G30660.1	Thale cress	peroxisome	74.32	65.08
PGSC0003DMT400066409	Potato	cytosol	27.19	64.75
PGSC0003DMT400066424	Potato	cytosol, nucleus, plastid	13.29	64.71
PGSC0003DMT400004567	Potato	extracellular	25.68	64.39
CDY57769	Canola	peroxisome	71.9	63.81
CDY55104	Canola	cytosol	71.6	63.03
CDX97894	Canola	peroxisome	73.11	62.37
CDY62818	Canola	peroxisome	75.53	62.34
CDY31775	Canola	peroxisome	71.6	61.88
CDY45439	Canola	plastid	73.72	61.77
PGSC0003DMT400000043	Potato	cytosol, mitochondrion, peroxisome	49.55	61.65
CDY31769	Canola	peroxisome	73.11	60.35
AT2G30650.1	Thale cress	peroxisome	68.88	60.32
Zm00001d007726_P001	Maize	peroxisome	44.41	60.0
PGSC0003DMT400066414	Potato	cytosol	30.82	59.65
VIT_09s0002g07160.t01	Wine grape	mitochondrion, peroxisome, plastid	64.35	57.57
Zm00001d007746_P002	Maize	peroxisome	32.93	57.37
Solyc01g108800.2.1	Tomato	cytoskeleton, cytosol, peroxisome	62.24	54.35
PGSC0003DMT400004521	Potato	cytosol	38.37	54.27
Solyc01g080930.2.1	Tomato	cytosol	62.24	53.79
PGSC0003DMT400004585	Potato	extracellular	41.99	52.06
KRH07311	Soybean	nucleus	60.42	51.68
PGSC0003DMT400000054	Potato	cytosol	58.61	50.52
EER91893	Sorghum	cytosol	58.31	50.0
Zm00001d007732_P002	Maize	extracellular	42.9	49.82
Zm00001d023779_P001	Maize	extracellular	57.7	49.48
TraesCS1D01G194800.2	Wheat	cytosol	56.8	49.34
GSMUA_Achr5P13870_001	Banana	cytosol	58.61	49.11
TraesCS1B01G206000.1	Wheat	cytosol	56.5	49.08
TraesCS1A01G190800.1	Wheat	plastid	56.5	47.7
GSMUA_Achr5P13900_001	Banana	cytosol	44.71	47.44
Zm00001d021132_P004	Maize	extracellular	57.7	47.28
Solyc01g094090.2.1	Tomato	cytosol	46.83	47.11
GSMUA_Achr8P14800_001	Banana	cytosol	56.5	47.1
VIT_15s0045g01190.t01	Wine grape	cytosol, nucleus, peroxisome	55.59	47.06
OQU84058	Sorghum	mitochondrion	56.5	45.61
KXG29172	Sorghum	peroxisome	53.17	45.48
HORVU1Hr1G049960.6	Barley	mitochondrion	56.5	44.31
Zm00001d007740_P001	Maize	peroxisome	49.85	43.77
PGSC0003DMT400066419	Potato	cytosol	31.72	43.75
CDY15581	Canola	cytosol	30.51	37.0
Os12t0264500-02	Rice	endoplasmic reticulum	56.5	36.45
CDX67831	Canola	mitochondrion	44.11	36.32
CDX98420	Canola	mitochondrion	44.11	36.32
Solyc01g108790.1.1	Tomato	nucleus	18.73	35.23
GSMUA_Achr5P13890_001	Banana	nucleus	16.92	35.0
CDY23311	Canola	mitochondrion	42.3	34.15
CDY39880	Canola	mitochondrion	41.99	33.9
CDX86518	Canola	cytosol	38.07	32.9
CDY15584	Canola	cytosol	37.46	32.72
CDY15583	Canola	cytosol	35.05	31.44
CDX86519	Canola	extracellular	18.73	31.31
CDY49269	Canola	extracellular, mitochondrion, nucleus, plastid	20.85	30.67
Zm00001d007728_P001	Maize	cytosol	12.69	29.58
CDY64934	Canola	cytosol	33.84	29.4
CDY01126	Canola	mitochondrion, plastid	33.53	26.3
CDX93011	Canola	plastid	32.93	25.77
CDX94817	Canola	mitochondrion, plastid	32.33	25.3
CDY72221	Canola	mitochondrion	14.8	23.56

Protein Annotations

EnsemblPlants:CDY45442	EnsemblPlantsGene:GSBRNA2T00082056001	Gene3D:3.90.226.40	GO:A0A078I5S1	GO:GO:0003674	GO:GO:0003824
GO:GO:0003860	GO:GO:0016787	InterPro:ClpP/crotonase-like_dom_sf	InterPro:HIBYL-CoA-H	PANTHER:PTHR43176	PANTHER:PTHR43176:SF6
PFAM:PF16113	ProteinID:CDY45442	ProteinID:CDY45442.1	SUPFAM:SSF52096	UniParc:UPI0004EE684B	UniProt:A0A078I5S1
MapMan:4.2.7.4	:	:	:	:	:

Description

BnaA05g12590DBnaA05g12590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I5S1]

Coordinates

chrLK032625:+:86599..89899

Molecular Weight (calculated)

37601.4 Da

IEP (calculated)

8.458

GRAVY (calculated)

-0.224

Length

331 amino acids

Sequence
(BLAST)

001: MSQRNINWSV LFYFRGLGKW RLGADFLSDQ YTLNYVMATY SKIQISIMNG IVMGGGAGVS IHGRFRIATE KTVFAMPETE LGLFPDVGAS YFLSRLPGFF
101: GEYVGLTGAR LDGAEMLACG LATHFVPSTR LTALEADLCR VVSNDPDTFS SKILNAYTQH PHLKQHSAYH RHVLDVTDKC FSRRTVEEII SALEREAIQE
201: PDEWISATLR ALKKASPASL KISLRSIREG RFQEVGQCLI REYRMVCHVL KGELSKDLVE RSLQHRVLIT QGVRAVVIDK DRKPKWEPQR LEQVTDNMVD
301: QYFKRMDEEE GWEDLKLPPR INLSSSIIAK L

Best Arabidopsis Sequence Match ( AT2G30650.1 )
(BLAST)

001: MASHSQVLVE EKSSVRILTF NRPKQLNALS FHMVSRLLQL FLAYEEDPSV KLVVLKGQGR AFSAGGDIPP IVRDILQGKL IRGAHYFKVG YTLNYVLSTY
101: RKPQVSILNG IVMGGGAGLS TNGRFRIATE NTVFAMPETA LGLFPDVGAS YFLSRLPGFF GEYVGLTGAR LDGAEMLACG LATHFVPSIS LTALEAELYK
201: VGSSNQTFIS TILDAYAEYP HLNQHSSYHR LDVIDRCFSK RTVEEIFSAL EREVTQKPND WLLATIQALE KASPSCLKIS LRSIREGRLQ GVGQCLIREY
301: RMVCHVMKGD ISKDFVEGCR AVLIDKDRNP KWQPRRLEDV TDSMVDQYFE RVEDEEGWED LKFPPRNNLP ALAIAAKL

Arabidopsis Description

Probable 3-hydroxyisobutyryl-CoA hydrolase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEY5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.