Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • peroxisome 3
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, peroxisome, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:peroxisome
PProwler:peroxisome
WoLF PSORT:peroxisome
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX79176
CDX79848
CDX79851
CDX81675
CDX84001
CDX88580
CDX91876
CDX93710
CDX99958
CDY01102
CDY03977
CDY07174
CDY07887
CDY08455
CDY11911
CDY14839
CDY15651
CDY20715
CDY22564
CDY32769
CDY32873
CDY33737
CDY35376
CDY41800
CDY47975
CDY48504
CDY50821
CDY52026
CDY65216
CDY67475
CDY68743
CDY72240

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G65940.1 CDX81675 AT1G14830.1 21798944
AT5G65940.1 CDX84001 AT1G14830.1 21798944
AT5G65940.1 CDY33737 AT1G14830.1 21798944
AT5G65940.1 CDY52026 AT1G14830.1 21798944
AT5G65940.1 CDY14839 AT2G42490.1 21798944
AT5G65940.1 CDY22564 AT2G42490.1 21798944
AT5G65940.1 CDY35376 AT2G42490.1 21798944
AT5G65940.1 CDY47975 AT2G42490.1 21798944
AT5G65940.1 CDX79848 AT2G42790.1 21798944
AT5G65940.1 CDX79851 AT2G42790.1 21798944
AT5G65940.1 CDY15651 AT2G42790.1 21798944
AT5G65940.1 CDY50821 AT2G42790.1 21798944
AT5G65940.1 CDY01102 AT3G12110.1 21798944
AT5G65940.1 CDY08455 AT3G12110.1 21798944
AT5G65940.1 CDX79176 AT4G01090.1 21798944
AT5G65940.1 CDX91876 AT4G01090.1 21798944
AT5G65940.1 CDY07174 AT4G01090.1 21798944
AT5G65940.1 CDY48504 AT4G01090.1 21798944
AT5G65940.1 CDY67475 AT4G01090.1 21798944
AT5G65940.1 CDX88580 AT5G56630.1 21798944
AT5G65940.1 CDX93710 AT5G56630.1 21798944
AT5G65940.1 CDX99958 AT5G56630.1 21798944
AT5G65940.1 CDY03977 AT5G56630.1 21798944
AT5G65940.1 CDY07887 AT5G56630.1 21798944
AT5G65940.1 CDY11911 AT5G56630.1 21798944
AT5G65940.1 CDY20715 AT5G56630.1 21798944
AT5G65940.1 CDY32769 AT5G56630.1 21798944
AT5G65940.1 CDY32873 AT5G56630.1 21798944
AT5G65940.1 CDY41800 AT5G56630.1 21798944
AT5G65940.1 CDY65216 AT5G56630.1 21798944
AT5G65940.1 CDY68743 AT5G56630.1 21798944
AT5G65940.1 CDY72240 AT5G56630.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY55104 Canola cytosol 98.12 97.34
AT5G65940.1 Thale cress peroxisome 86.33 85.19
CDY31775 Canola peroxisome 80.7 78.59
CDX97894 Canola peroxisome 80.97 77.84
CDY62818 Canola peroxisome 82.04 76.31
CDY31769 Canola peroxisome 82.04 76.31
CDY45442 Canola mitochondrion 63.81 71.9
VIT_09s0002g07160.t01 Wine grape mitochondrion, peroxisome, plastid 70.24 70.81
CDY45439 Canola plastid 74.53 70.38
Solyc01g080930.2.1 Tomato cytosol 70.51 68.67
CDY71268 Canola cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole 27.35 68.46
PGSC0003DMT400066411 Potato nucleus 26.01 66.44
PGSC0003DMT400004567 Potato extracellular 23.06 65.15
KRH07311 Soybean nucleus 67.56 65.12
Solyc01g108800.2.1 Tomato cytoskeleton, cytosol, peroxisome 65.95 64.91
EER91893 Sorghum cytosol 65.68 63.47
Solyc01g094090.2.1 Tomato cytosol 55.76 63.22
PGSC0003DMT400000054 Potato cytosol 64.88 63.02
PGSC0003DMT400066414 Potato cytosol 28.69 62.57
PGSC0003DMT400066424 Potato cytosol, nucleus, plastid 11.26 61.76
GSMUA_Achr5P13900_001 Banana cytosol 51.47 61.54
TraesCS1B01G206000.1 Wheat cytosol 62.73 61.42
TraesCS1D01G194800.2 Wheat cytosol 62.73 61.42
Zm00001d007726_P001 Maize peroxisome 40.21 61.22
Zm00001d021132_P004 Maize extracellular 65.95 60.89
Zm00001d007746_P002 Maize peroxisome 30.83 60.53
PGSC0003DMT400000043 Potato cytosol, mitochondrion, peroxisome 43.16 60.53
PGSC0003DMT400066419 Potato cytosol 38.61 60.0
GSMUA_Achr5P13870_001 Banana cytosol 63.27 59.75
PGSC0003DMT400066409 Potato cytosol 22.25 59.71
TraesCS1A01G190800.1 Wheat plastid 62.73 59.69
Zm00001d023779_P001 Maize extracellular 61.13 59.07
PGSC0003DMT400004521 Potato cytosol 37.0 58.97
GSMUA_Achr8P14800_001 Banana cytosol 61.66 57.93
PGSC0003DMT400004585 Potato extracellular 41.29 57.68
KXG29172 Sorghum peroxisome 59.52 57.36
OQU84058 Sorghum mitochondrion 62.47 56.83
HORVU1Hr1G049960.6 Barley mitochondrion 62.47 55.21
Zm00001d007740_P001 Maize peroxisome 51.21 50.66
VIT_15s0045g01190.t01 Wine grape cytosol, nucleus, peroxisome 52.81 50.38
Zm00001d007732_P002 Maize extracellular 37.27 48.77
Zm00001d007728_P001 Maize cytosol 17.69 46.48
Os12t0264500-02 Rice endoplasmic reticulum 63.54 46.2
CDX67831 Canola mitochondrion 47.72 44.28
CDX98420 Canola mitochondrion 47.72 44.28
GSMUA_Achr5P13890_001 Banana nucleus 17.96 41.88
CDX86518 Canola cytosol 42.09 40.99
CDY23311 Canola mitochondrion 44.77 40.73
CDY39880 Canola mitochondrion 44.5 40.49
CDY72221 Canola mitochondrion 22.52 40.38
CDY15584 Canola cytosol 41.02 40.37
CDY49269 Canola extracellular, mitochondrion, nucleus, plastid 23.32 38.67
Solyc01g108790.1.1 Tomato nucleus 17.69 37.5
CDY15581 Canola cytosol 27.35 37.36
CDY15583 Canola cytosol 35.92 36.31
CDY64934 Canola cytosol 36.46 35.7
CDY01126 Canola mitochondrion, plastid 36.46 32.23
CDX86519 Canola extracellular 16.89 31.82
CDX94817 Canola mitochondrion, plastid 35.92 31.68
CDX93011 Canola plastid 35.66 31.44
Protein Annotations
EnsemblPlants:CDY57769EnsemblPlantsGene:GSBRNA2T00022613001Gene3D:3.90.226.40GO:A0A078J2P8GO:GO:0003674GO:GO:0003824
GO:GO:0003860GO:GO:0016787InterPro:ClpP/crotonase-like_dom_sfInterPro:HIBYL-CoA-HPANTHER:PTHR43176PFAM:PF16113
ProteinID:CDY57769ProteinID:CDY57769.1SUPFAM:SSF52096UniParc:UPI0004EF02FEUniProt:A0A078J2P8MapMan:4.2.7.4
MapMan:4.2.7.6.1:::::
Description
BnaC02g45100DBnaC02g45100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J2P8]
Coordinates
chrLK033602:+:39394..42561
Molecular Weight (calculated)
41483.3 Da
IEP (calculated)
8.046
GRAVY (calculated)
-0.088
Length
373 amino acids
Sequence
(BLAST)
001: MASHSQVLVE EKSSVRILTL NRPKQLNALS FQMISRLLQL FLAYEEDPSV KLVILKGQGR AFCAGGDVSA VVRDIGQGNW RLGAKFFADE YMLNYVMATY
101: TKPQVSILNG IVMGGGAGVS VHGPFRIATQ NTVFAMPETV LGLFPDVGAS YFLSRLPGFF GEYVGLTGAR LDGADMLACG LATHYLPSTR LTALEAELCR
201: VDSSDPTVVS AILDAYTQNP HLKQQSAYHR QVLDVIDRCF SGRTVEEIIA ALEREASDDW ISTTIRALKK ASPASLKISL RSIREGRLQG VGQCLSREYR
301: MVCHVLKGDI SKDFVEGCRA ILIDKDKNPK WEPWRLEEMK DRMVEQYFKR VEEEEDLKLP ARKNLPALAM AKL
Best Arabidopsis Sequence Match ( AT5G65940.4 )
(BLAST)
001: MAVEMASQSQ VLVEEKSSVR ILTLNRPKQL NALSFHMISR LLQLFLAFEE DPSVKLVILK GHGRAFCAGG DVAAVVRDIN QGNWRLGANY FSSEYMLNYV
101: MATYSKAQVS ILNGIVMGGG AGVSVHGRFR IATENTVFAM PETALGLFPD VGASYFLSRL PGFFGEYVGL TGARLDGAEM LACGLATHFV PSTRLTALEA
201: DLCRINSNDP TFASTILDAY TQHPRLKQQS AYRRLDVIDR CFSRRTVEEI ISALEREATQ EADGWISATI QALKKGSPAS LKISLRSIRE GRLQGVGQCL
301: IREYRMVCHV MKGEISKDFV EGCRAILVDK DKNPKWEPRR LEDMKDSMVE QYFERVERED DLKLPPRNNL PALGIAKL
Arabidopsis Description
CHY13-hydroxyisobutyryl-CoA hydrolase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LKJ1]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.