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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytoskeleton, cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra034778.1-P Field mustard cytosol 99.73 99.73
CDY08455 Canola cytosol 99.73 99.73
AT3G12110.1 Thale cress cytosol 99.2 99.2
KRH29804 Soybean endoplasmic reticulum, mitochondrion, nucleus 97.08 97.08
VIT_13s0019g01240.t01 Wine grape cytosol 96.82 96.82
VIT_06s0004g04570.t01 Wine grape cytosol 96.55 96.81
GSMUA_Achr10P... Banana cytosol 67.37 96.58
KRH38098 Soybean cytosol 96.55 96.55
KRH70465 Soybean mitochondrion, nucleus 96.55 96.55
KRH71847 Soybean endoplasmic reticulum, nucleus 96.55 96.55
KRH10268 Soybean mitochondrion, nucleus 96.55 96.55
KRH01660 Soybean mitochondrion, nucleus 96.55 96.55
VIT_08s0007g06520.t01 Wine grape cytosol 96.29 96.29
GSMUA_AchrUn_... Banana plasma membrane 96.29 96.29
CDX71119 Canola cytosol 96.02 96.02
KRH56507 Soybean endoplasmic reticulum, mitochondrion 96.02 96.02
KRH23061 Soybean endoplasmic reticulum, mitochondrion, nucleus 96.02 96.02
CDX99111 Canola cytosol 96.02 96.02
CDY53444 Canola cytosol 96.02 96.02
CDX88698 Canola cytosol 96.02 96.02
CDX76191 Canola cytosol 96.02 96.02
CDX86081 Canola cytosol 96.02 96.02
CDY48688 Canola cytosol 86.47 95.88
KRG93168 Soybean mitochondrion, nucleus 95.76 95.76
CDY21777 Canola cytosol 95.76 95.76
KRG95386 Soybean cytosol 95.76 95.76
CDX82985 Canola cytosol 95.76 95.76
KRH67068 Soybean endoplasmic reticulum, mitochondrion, nucleus 95.76 95.76
CDX78202 Canola cytosol 95.76 95.76
CDY30846 Canola cytosol 95.49 95.49
CDY38066 Canola cytosol 95.49 95.49
CDX85794 Canola cytosol 89.39 95.47
CDX73527 Canola cytosol 89.39 95.47
CDY40061 Canola cytosol 89.39 95.47
CDY21607 Canola cytosol 95.23 95.23
CDX69885 Canola cytosol 95.23 95.23
CDX74944 Canola cytosol 94.96 94.96
CDX91373 Canola cytosol 94.96 94.96
CDY30296 Canola cytosol 88.86 94.9
CDY31972 Canola cytosol 88.86 94.9
CDX81140 Canola cytosol 94.69 94.69
CDY56544 Canola cytosol 94.69 94.69
CDY65255 Canola cytosol 83.02 94.56
CDX93360 Canola cytosol 82.76 94.26
CDY07779 Canola cytosol 87.8 94.03
PGSC0003DMT400023026 Potato cytosol 93.9 93.9
PGSC0003DMT400049429 Potato cytosol 93.1 93.1
Solyc10g086460.1.1 Tomato unclear 92.84 92.84
GSMUA_Achr7P18630_001 Banana cytosol 78.51 92.5
CDX87810 Canola cytosol 92.31 92.31
CDX99315 Canola cytosol 79.05 92.26
CDX95498 Canola cytosol 91.78 91.78
CDY61982 Canola cytosol 91.78 91.78
CDX92272 Canola cytosol 91.78 91.78
CDY18545 Canola cytosol 91.78 91.78
CDX82326 Canola cytosol 91.51 91.51
CDX92271 Canola cytosol 76.39 90.85
CDX94448 Canola cytosol 91.78 89.41
CDX79746 Canola cytosol 87.8 88.98
Solyc09g010750.1.1 Tomato cytosol 40.58 85.47
KRH24799 Soybean cytosol 92.31 84.88
CDY71336 Canola cytosol 54.64 74.91
CDY14813 Canola cytosol 67.64 72.65
CDY06885 Canola cytosol 62.86 71.6
CDX67573 Canola cytosol 54.38 67.43
CDY33033 Canola nucleus 77.98 54.34
CDX80274 Canola nucleus 76.66 52.64
CDY00172 Canola cytosol 44.56 43.19
CDY20066 Canola cytosol 44.56 43.19
CDY52404 Canola cytosol 44.83 42.78
CDY13674 Canola cytosol 44.83 42.78
CDY62715 Canola cytosol 37.93 39.39
CDY56730 Canola cytosol 37.4 39.17
CDX67843 Canola cytosol 37.4 39.17
CDX71774 Canola cytosol 36.6 38.66
CDX83847 Canola cytosol 42.97 36.9
CDY26159 Canola cytosol 43.24 36.88
CDY19213 Canola cytosol 43.24 36.88
CDX96721 Canola cytosol 42.71 36.76
CDY52344 Canola cytosol 37.93 35.48
CDY21087 Canola cytosol 38.2 33.72
CDY34585 Canola cytosol 37.93 33.49
CDX98005 Canola cytosol 37.67 33.26
CDY19392 Canola cytosol 37.4 33.02
CDY42404 Canola cytosol 31.57 27.87
Protein Annotations
EnsemblPlants:CDY01102EnsemblPlantsGene:GSBRNA2T00111153001Gene3D:3.30.420.40Gene3D:3.90.640.10GO:A0A078EIY7InterPro:Actin
InterPro:Actin/actin-like_CSInterPro:Actin_CSPANTHER:PTHR11937PANTHER:PTHR11937:SF276PFAM:PF00022PRINTS:PR00190
ProteinID:CDY01102ProteinID:CDY01102.1ScanProsite:PS00406ScanProsite:PS00432ScanProsite:PS01132SMART:SM00268
SUPFAM:SSF53067UniParc:UPI0004EBF9EBMapMan:20.2.1:::
Description
BnaC05g40980D
Coordinates
chrLK031923:+:1168090..1169956
Molecular Weight (calculated)
41661.0 Da
IEP (calculated)
5.047
GRAVY (calculated)
-0.174
Length
377 amino acids
Sequence
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDY LMKILTERGY
201: SFTTTAEREI VRDVKEKLAY IALDYEQEME TANTSSSVDK SYELPDGQVI TIGGERFRCP EVLFQPSLVG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDEAGPS IVHRKCF
Best Arabidopsis Sequence Match ( AT3G12110.1 )
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDY LMKILTERGY
201: SFTTSAEREI VRDVKEKLAY IALDYEQEME TANTSSSVEK SYELPDGQVI TIGGERFRCP EVLFQPSLVG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
Arabidopsis Description
ACT11Actin-11 [Source:UniProtKB/Swiss-Prot;Acc:P53496]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.