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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX67843 Canola cytosol 98.61 98.61
AT3G60830.1 Thale cress cytosol 95.83 95.04
CDX71774 Canola cytosol 92.22 93.0
CDY62715 Canola cytosol 93.06 92.29
CDY52344 Canola cytosol 94.17 84.12
VIT_13s0064g00730.t01 Wine grape cytosol 83.33 83.1
KRH13968 Soybean cytosol, nucleus 80.28 80.06
KRH32953 Soybean cytosol 80.28 80.06
KRH23861 Soybean cytosol, nucleus 80.0 79.78
PGSC0003DMT400019210 Potato cytosol 79.17 79.17
Solyc11g008500.1.1 Tomato cytosol, nucleus 79.17 79.17
KRH39934 Soybean cytosol 72.5 79.09
GSMUA_AchrUn_... Banana endoplasmic reticulum 61.11 75.6
EER91551 Sorghum cytosol 74.44 74.44
Os03t0783000-01 Rice cytosol, nucleus 74.17 74.17
TraesCS5D01G429200.1 Wheat cytosol 73.61 73.2
TraesCS5A01G420600.1 Wheat cytosol, nucleus 73.33 72.93
TraesCS5B01G422700.1 Wheat cytosol 73.33 72.93
VIT_00s0214g00170.t01 Wine grape cytosol 35.28 72.57
Zm00001d014112_P003 Maize cytosol 73.89 64.41
HORVU5Hr1G102220.2 Barley plastid 73.06 60.05
CDY65255 Canola cytosol 36.94 40.18
CDX93360 Canola cytosol 36.67 39.88
CDX73527 Canola cytosol 38.33 39.09
CDX85794 Canola cytosol 38.33 39.09
CDY40061 Canola cytosol 38.33 39.09
CDY31972 Canola cytosol 38.06 38.81
CDY30296 Canola cytosol 38.06 38.81
CDX99315 Canola cytosol 34.44 38.39
CDY07779 Canola cytosol 37.5 38.35
CDY48688 Canola cytosol 35.83 37.94
CDY01102 Canola cytosol 39.17 37.4
CDY30846 Canola cytosol 38.89 37.14
CDX76191 Canola cytosol 38.89 37.14
CDX78202 Canola cytosol 38.89 37.14
CDY38066 Canola cytosol 38.89 37.14
CDY21777 Canola cytosol 38.89 37.14
CDY21607 Canola cytosol 38.89 37.14
CDX71119 Canola cytosol 38.89 37.14
CDY53444 Canola cytosol 38.89 37.14
CDX82985 Canola cytosol 38.89 37.14
CDY08455 Canola cytosol 38.89 37.14
CDX86081 Canola cytosol 38.89 37.14
CDX99111 Canola cytosol 38.89 37.14
CDX69885 Canola cytosol 38.89 37.14
CDX88698 Canola cytosol 38.89 37.14
CDX81140 Canola cytosol 38.61 36.87
CDY56544 Canola cytosol 38.61 36.87
CDX74944 Canola cytosol 38.61 36.87
CDX91373 Canola cytosol 38.61 36.87
CDX87810 Canola cytosol 38.33 36.6
CDX79746 Canola cytosol 37.5 36.29
CDX92272 Canola cytosol 37.78 36.07
CDX95498 Canola cytosol 37.78 36.07
CDY61982 Canola cytosol 37.78 36.07
CDY18545 Canola cytosol 37.78 36.07
CDX82326 Canola cytosol 37.5 35.81
CDX94448 Canola cytosol 38.06 35.4
CDX92271 Canola cytosol 29.44 33.44
CDY14813 Canola cytosol 32.22 33.05
CDY06885 Canola cytosol 29.44 32.02
CDY71336 Canola cytosol 23.89 31.27
CDX67573 Canola cytosol 22.78 26.97
CDY20066 Canola cytosol 26.39 24.42
CDY00172 Canola cytosol 26.39 24.42
CDY52404 Canola cytosol 26.67 24.3
CDY13674 Canola cytosol 26.67 24.3
CDX83847 Canola cytosol 28.61 23.46
CDY34585 Canola cytosol 27.78 23.42
CDY21087 Canola cytosol 27.78 23.42
CDY26159 Canola cytosol 28.33 23.08
CDY19213 Canola cytosol 28.33 23.08
CDX96721 Canola cytosol 28.06 23.06
CDX98005 Canola cytosol 27.22 22.95
CDY19392 Canola cytosol 26.67 22.48
CDY33033 Canola nucleus 32.22 21.44
CDY42404 Canola cytosol 25.28 21.31
CDX80274 Canola nucleus 31.67 20.77
Protein Annotations
MapMan:12.4.2.4Gene3D:3.30.420.40Gene3D:3.90.640.10GO:A0A078IXQ9UniProt:A0A078IXQ9InterPro:Actin
InterPro:Arp7_plantEnsemblPlants:CDY56730ProteinID:CDY56730ProteinID:CDY56730.1GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0006325GO:GO:0008150GO:GO:0009987GO:GO:0016043
GO:GO:0032502EnsemblPlantsGene:GSBRNA2T00019973001PFAM:PF00022PRINTS:PR00190PANTHER:PTHR11937PANTHER:PTHR11937:SF257
SMART:SM00268SUPFAM:SSF53067UniParc:UPI0004EE0329:::
Description
BnaCnng31150DBnaCnng31150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IXQ9]
Coordinates
chrLK033514:+:54561..56625
Molecular Weight (calculated)
39504.0 Da
IEP (calculated)
4.413
GRAVY (calculated)
-0.134
Length
360 amino acids
Sequence
(BLAST)
001: MEALVVDAGS KLLKAGAAIP DQSPAMIIPS QMKRMVDDAS DNPTTVFEDV TLDPIERGFI RDWDAMEDLL RYVVYTGLGW EEGNEGNILF TDPLCTPKAI
101: REQLVQLMFE TFNVSGFYAS EQAVLSLYAV GRISGCTVDI GHGKIDIAPV LEGAVQHIAS KRFELGGTDL TKLFAQELGK SNPSVNLSMS DVETLKEQYA
201: NCAEDEVAYE KTQNCEIEQH TLPDGQVISI GRERYSVGEA LFQPSILGLE EHGIVEQLVR IISTVSSENH RQLLENTVLC GGTTSMTGFE GRFQKEASLC
301: SSAIRPTLVK PPEYMSENLG LYSAWIGGAI LAKVVFPQNQ HVTKADYDET GPSVVHRKCF
Best Arabidopsis Sequence Match ( AT3G60830.1 )
(BLAST)
001: MEALVVDAGS KFLKAGAAIP DQSPAMIIPS QMKRMVDDGS SSADNPTTVF EDVTLDPIER GLIRDWDAME DLLRYVVYTG LGWEEGNEGN ILFTDPLCTP
101: KAIREQLVQL MFETFNVSGF YASEQAVLSL YAVGRISGCT VDIGHGKIDI APVLEGAVQH IASKRFELGG TELTKLFAQE LGKTNPSMNL SMSDVEKLKE
201: QYANCAEDEI AYKKTQNCEI EQHTLPDGQV ISIGRERYSV GEALFQPSIL GLEEHGIVEQ LVRIISTVSS ENHRQLLENT VLCGGTTSMT GFESRFQKEA
301: NLCSSAIRPT LVKPPEYMPE NLGMYSAWVG GAILAKVVFP QNQHVTKADY DETGPSVVHR KCF
Arabidopsis Description
ARP7Actin-related protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8L4Y5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.