Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_13s0064g00730.t01 | Wine grape | cytosol | 86.86 | 42.11 |
| KRH13968 | Soybean | cytosol, nucleus | 76.0 | 36.84 |
| PGSC0003DMT400019210 | Potato | cytosol | 75.43 | 36.67 |
| KRH23861 | Soybean | cytosol, nucleus | 75.43 | 36.57 |
| Solyc11g008500.1.1 | Tomato | cytosol, nucleus | 74.86 | 36.39 |
| KRH32953 | Soybean | cytosol | 73.14 | 35.46 |
| CDY56730 | Canola | cytosol | 72.57 | 35.28 |
| Bra003429.1-P | Field mustard | cytosol | 72.0 | 35.0 |
| CDX67843 | Canola | cytosol | 72.0 | 35.0 |
| AT3G60830.1 | Thale cress | cytosol | 72.57 | 34.99 |
| CDX71774 | Canola | cytosol | 70.29 | 34.45 |
| CDY62715 | Canola | cytosol | 70.29 | 33.88 |
| EER91551 | Sorghum | cytosol | 67.43 | 32.78 |
| Os03t0783000-01 | Rice | cytosol, nucleus | 66.86 | 32.5 |
| KRH39934 | Soybean | cytosol | 61.14 | 32.42 |
| TraesCS5D01G429200.1 | Wheat | cytosol | 66.29 | 32.04 |
| TraesCS5A01G420600.1 | Wheat | cytosol, nucleus | 66.29 | 32.04 |
| TraesCS5B01G422700.1 | Wheat | cytosol | 66.29 | 32.04 |
| CDY52344 | Canola | cytosol | 70.86 | 30.77 |
| Zm00001d014112_P003 | Maize | cytosol | 67.43 | 28.57 |
| HORVU5Hr1G102220.2 | Barley | plastid | 66.29 | 26.48 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 37.14 | 22.34 |
| Bra007566.1-P | Field mustard | cytosol | 36.57 | 19.51 |
| VIT_11s0016g00770.t01 | Wine grape | cytosol | 33.71 | 15.69 |
| VIT_06s0004g04570.t01 | Wine grape | cytosol | 32.0 | 14.89 |
| VIT_08s0007g06520.t01 | Wine grape | cytosol | 32.0 | 14.85 |
| VIT_12s0178g00200.t01 | Wine grape | cytosol | 32.0 | 14.85 |
| VIT_13s0019g01240.t01 | Wine grape | cytosol | 31.43 | 14.59 |
| VIT_14s0068g01630.t01 | Wine grape | cytosol | 27.43 | 12.34 |
| VIT_04s0044g00580.t01 | Wine grape | extracellular | 32.0 | 12.17 |
| VIT_01s0137g00280.t01 | Wine grape | cytosol | 28.0 | 11.45 |
| VIT_11s0016g05490.t01 | Wine grape | cytosol | 24.0 | 9.7 |
| VIT_17s0000g04010.t01 | Wine grape | mitochondrion | 17.14 | 6.79 |
Protein Annotations
| Gene3D:3.30.420.40 | MapMan:35.1 | InterPro:Actin | InterPro:Arp7_plant | ProteinID:CCB60980 | ProteinID:CCB60980.1 |
| UniProt:F6I213 | EMBL:FN596523 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006325 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0032502 | PFAM:PF00022 |
| PRINTS:PR00190 | PANTHER:PTHR11937 | PANTHER:PTHR11937:SF257 | SUPFAM:SSF53067 | UniParc:UPI0002109994 | ArrayExpress:VIT_00s0214g00170 |
| EnsemblPlantsGene:VIT_00s0214g00170 | EnsemblPlants:VIT_00s0214g00170.t01 | RefSeq:XP_003635098 | RefSeq:XP_003635098.1 | : | : |
Description
No Description!
Coordinates
chrUn:+:13433482..13434137
Molecular Weight (calculated)
19576.9 Da
IEP (calculated)
4.574
GRAVY (calculated)
0.206
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAVVVDAGS KLLKAGFTIP DQAPSMLIPT QMKHILEDGP LIDNLLFEDI TVDPVVRGLI RDWDTMEDLL NHVLYTGLRW EMGNEGHILF TDPLSTPKAF
101: REQLVQLMFE IFNISDFYAS EQVVLSLHVV GRISGCTIDF GNWKIDIAPV IKGAVQHITS RRFEIGGVDL TKLLA
101: REQLVQLMFE IFNISDFYAS EQVVLSLHVV GRISGCTIDF GNWKIDIAPV IKGAVQHITS RRFEIGGVDL TKLLA
001: MEALVVDAGS KFLKAGAAIP DQSPAMIIPS QMKRMVDDGS SSADNPTTVF EDVTLDPIER GLIRDWDAME DLLRYVVYTG LGWEEGNEGN ILFTDPLCTP
101: KAIREQLVQL MFETFNVSGF YASEQAVLSL YAVGRISGCT VDIGHGKIDI APVLEGAVQH IASKRFELGG TELTKLFAQE LGKTNPSMNL SMSDVEKLKE
201: QYANCAEDEI AYKKTQNCEI EQHTLPDGQV ISIGRERYSV GEALFQPSIL GLEEHGIVEQ LVRIISTVSS ENHRQLLENT VLCGGTTSMT GFESRFQKEA
301: NLCSSAIRPT LVKPPEYMPE NLGMYSAWVG GAILAKVVFP QNQHVTKADY DETGPSVVHR KCF
101: KAIREQLVQL MFETFNVSGF YASEQAVLSL YAVGRISGCT VDIGHGKIDI APVLEGAVQH IASKRFELGG TELTKLFAQE LGKTNPSMNL SMSDVEKLKE
201: QYANCAEDEI AYKKTQNCEI EQHTLPDGQV ISIGRERYSV GEALFQPSIL GLEEHGIVEQ LVRIISTVSS ENHRQLLENT VLCGGTTSMT GFESRFQKEA
301: NLCSSAIRPT LVKPPEYMPE NLGMYSAWVG GAILAKVVFP QNQHVTKADY DETGPSVVHR KCF
Arabidopsis Description
ARP7Actin-related protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8L4Y5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.