CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0783000-01	Rice	cytosol, nucleus	91.94	91.94
TraesCS5D01G429200.1	Wheat	cytosol	90.0	89.5
TraesCS5B01G422700.1	Wheat	cytosol	90.0	89.5
TraesCS5A01G420600.1	Wheat	cytosol, nucleus	90.0	89.5
Zm00001d014112_P003	Maize	cytosol	96.11	83.78
VIT_13s0064g00730.t01	Wine grape	cytosol	77.78	77.56
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	61.11	75.6
Solyc11g008500.1.1	Tomato	cytosol, nucleus	74.72	74.72
PGSC0003DMT400019210	Potato	cytosol	74.72	74.72
CDY56730	Canola	cytosol	74.44	74.44
HORVU5Hr1G102220.2	Barley	plastid	90.28	74.2
Bra003429.1-P	Field mustard	cytosol	73.89	73.89
CDX67843	Canola	cytosol	73.61	73.61
AT3G60830.1	Thale cress	cytosol	73.61	73.0
CDY62715	Canola	cytosol	73.06	72.45
CDX71774	Canola	cytosol	71.67	72.27
KRH32953	Soybean	cytosol	72.22	72.02
KRH23861	Soybean	cytosol, nucleus	71.67	71.47
KRH13968	Soybean	cytosol, nucleus	71.39	71.19
KRH39934	Soybean	cytosol	65.0	70.91
VIT_00s0214g00170.t01	Wine grape	cytosol	32.78	67.43
CDY52344	Canola	cytosol	72.22	64.52
Bra007566.1-P	Field mustard	cytosol	54.72	60.06
EES08028	Sorghum	cytosol	35.83	34.22
KXG37705	Sorghum	cytosol	35.83	34.22
KXG23031	Sorghum	cytosol	35.83	34.22
EER90564	Sorghum	cytosol	35.56	33.95
KXG21029	Sorghum	cytosol	35.56	33.95
EES01810	Sorghum	cytosol	35.28	33.78
EER93954	Sorghum	cytosol	34.72	33.16
EES19603	Sorghum	cytosol	34.44	32.98
KXG21030	Sorghum	cytosol	30.56	28.28
EER99952	Sorghum	cytosol	27.5	25.45
KXG30555	Sorghum	cytosol	26.94	22.4
KXG24330	Sorghum	cytosol	26.39	21.84
OQU79631	Sorghum	cytosol	25.56	21.3
EER93001	Sorghum	cytosol	25.83	20.99

Protein Annotations

MapMan:12.4.2.4	Gene3D:3.30.420.40	Gene3D:3.90.640.10	EntrezGene:8059297	InterPro:Actin	InterPro:Arp7_plant
UniProt:C5X0D4	EnsemblPlants:EER91551	ProteinID:EER91551	ProteinID:EER91551.1	GO:GO:0000003	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006325	GO:GO:0007275	GO:GO:0008150
GO:GO:0009653	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009838	GO:GO:0009908
GO:GO:0009987	GO:GO:0010227	GO:GO:0016043	GO:GO:0032502	PFAM:PF00022	PRINTS:PR00190
PANTHER:PTHR11937	PANTHER:PTHR11937:SF257	SMART:SM00268	EnsemblPlantsGene:SORBI_3001G234200	SUPFAM:SSF53067	unigene:Sbi.14761
UniParc:UPI0001A81F4E	RefSeq:XP_002464553.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:23092986..23098559

Molecular Weight (calculated)

39419.2 Da

IEP (calculated)

4.410

GRAVY (calculated)

-0.046

Length

360 amino acids

Sequence
(BLAST)

001: MDAVVVDAGS KLLKAGIAAP DQAPPLVMPS KMKVDVEDQE LADGAVVEEV VQPVVRGFVK DWDAMEDLLN YVLYRNIGWE IGDEGQILFT EPLFTPKTLR
101: EQLVQLMFEK FNVSGFYASE QAVLSLYAVG RISGCTVDIG HGKIDIAPVC EGAVQHIASK RLEIGGVDLT NLFAQELKKS NPSVNLDVSD VERLKEQYAC
201: CAEDQLAFEA IGSSCQPEKH TLPDGQVITI EKEGYIVGEA LFQPCILGLE DYGIVHQLVT SVSNVSSEYH RQLLENTMLC GGTASMTGFE DRFQREANLS
301: ASAICPSLVK PPEYMPENLA RYSAWLGGAI LAKVVFPQNQ HVTKGEYDET GPSIVHKKCF

Best Arabidopsis Sequence Match ( AT3G60830.1 )
(BLAST)

001: MEALVVDAGS KFLKAGAAIP DQSPAMIIPS QMKRMVDDGS SSADNPTTVF EDVTLDPIER GLIRDWDAME DLLRYVVYTG LGWEEGNEGN ILFTDPLCTP
101: KAIREQLVQL MFETFNVSGF YASEQAVLSL YAVGRISGCT VDIGHGKIDI APVLEGAVQH IASKRFELGG TELTKLFAQE LGKTNPSMNL SMSDVEKLKE
201: QYANCAEDEI AYKKTQNCEI EQHTLPDGQV ISIGRERYSV GEALFQPSIL GLEEHGIVEQ LVRIISTVSS ENHRQLLENT VLCGGTTSMT GFESRFQKEA
301: NLCSSAIRPT LVKPPEYMPE NLGMYSAWVG GAILAKVVFP QNQHVTKADY DETGPSVVHR KCF

Arabidopsis Description

ARP7Actin-related protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8L4Y5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.