Factsheet for Bra003429.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67843	Canola	cytosol	98.89	98.89
AT3G60830.1	Thale cress	cytosol	95.0	94.21
VIT_13s0064g00730.t01	Wine grape	cytosol	83.06	82.83
Bra007566.1-P	Field mustard	cytosol	73.33	80.49
KRH13968	Soybean	cytosol, nucleus	79.72	79.5
KRH32953	Soybean	cytosol	79.72	79.5
KRH23861	Soybean	cytosol, nucleus	79.44	79.22
PGSC0003DMT400019210	Potato	cytosol	79.17	79.17
Solyc11g008500.1.1	Tomato	cytosol, nucleus	79.17	79.17
KRH39934	Soybean	cytosol	71.94	78.48
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	60.56	74.91
EER91551	Sorghum	cytosol	73.89	73.89
Os03t0783000-01	Rice	cytosol, nucleus	73.61	73.61
TraesCS5D01G429200.1	Wheat	cytosol	73.06	72.65
TraesCS5A01G420600.1	Wheat	cytosol, nucleus	72.78	72.38
TraesCS5B01G422700.1	Wheat	cytosol	72.78	72.38
VIT_00s0214g00170.t01	Wine grape	cytosol	35.0	72.0
Zm00001d014112_P003	Maize	cytosol	73.33	63.92
HORVU5Hr1G102220.2	Barley	plastid	72.5	59.59
Bra009081.1-P	Field mustard	cytosol	38.06	38.81
Bra022356.1-P	Field mustard	cytosol	34.44	38.39
Bra006719.1-P	Field mustard	cytosol	35.28	38.25
Bra020319.1-P	Field mustard	cytosol	35.83	37.94
Bra005178.1-P	Field mustard	cytosol	37.22	37.85
Bra034778.1-P	Field mustard	cytosol	39.44	37.67
Bra000010.1-P	Field mustard	cytosol	39.17	37.4
Bra033819.1-P	Field mustard	cytosol	38.89	37.14
Bra028615.1-P	Field mustard	cytosol	38.89	37.14
Bra007025.1-P	Field mustard	cytosol	38.89	37.14
Bra014865.1-P	Field mustard	cytosol	38.89	37.14
Bra019486.1-P	Field mustard	cytosol	38.89	37.14
Bra018210.1-P	Field mustard	cytosol	38.89	37.14
Bra006033.1-P	Field mustard	cytosol	38.61	36.87
Bra017166.1-P	Field mustard	cytosol	38.61	36.87
Bra016895.1-P	Field mustard	cytosol	29.17	34.65
Bra003156.1-P	Field mustard	cytosol	19.17	33.5
Bra037560.1-P	Field mustard	cytoskeleton, cytosol	31.67	32.29
Bra025243.1-P	Field mustard	cytosol	26.11	25.68
Bra039097.1-P	Field mustard	cytosol	26.39	24.42
Bra016738.1-P	Field mustard	cytosol	27.5	23.18
Bra002571.1-P	Field mustard	nucleus	38.61	22.98
Bra019815.1-P	Field mustard	cytosol	26.94	22.72
Bra030818.1-P	Field mustard	cytosol	12.78	20.72
Bra019816.1-P	Field mustard	nucleus	7.78	7.43

Protein Annotations

MapMan:12.4.2.4	Gene3D:3.30.420.40	Gene3D:3.90.640.10	InterPro:Actin	InterPro:Arp7_plant	EnsemblPlantsGene:Bra003429
EnsemblPlants:Bra003429.1	EnsemblPlants:Bra003429.1-P	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006325	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0032502	UniProt:M4CGU6
PFAM:PF00022	PRINTS:PR00190	PANTHER:PTHR11937	PANTHER:PTHR11937:SF257	SMART:SM00268	SUPFAM:SSF53067
UniParc:UPI00025417F6	:	:	:	:	:

Description

AT3G60830 (E=5e-198) ATARP7, ARP7 | ATARP7 (ACTIN-RELATED PROTEIN 7); structural constituent of cytoskeleton

Coordinates

chrA07:+:13154291..13155948

Molecular Weight (calculated)

39541.1 Da

IEP (calculated)

4.417

GRAVY (calculated)

-0.146

Length

360 amino acids

Sequence
(BLAST)

001: MEALVVDAGS KLLKAGAAIP DQSPAMIIPS QMKRMVDDAP ENPTTVFEDV TLDPIERGFI RDWDAMEDLL RYVVYTGLGW EEGNEGNILF TDPLCTPKAI
101: REQLVQLMFE TFNVSGFYAS EQAVLSLYAV GRISGCTVDI GHGKIDIAPV LEGAVQHIAS KRFELGGTDL TKLFAQELGK SNPSVNLSMS DVETLKEQYA
201: NCAEDETAYE KTQNCEIEQH TLPDGQVINI GRERYSVGEA LFQPSILGLE EHGIVEQLVR IISTVSSENH RQLLENTVLC GGTTSMTGFE GRFQKEASLC
301: SSAIRPTLVK PPEYMSENLG LYSAWIGGAI LAKVVFPQNQ HVTKADFDET GPSVVHRKCF

Best Arabidopsis Sequence Match ( AT3G60830.1 )
(BLAST)

001: MEALVVDAGS KFLKAGAAIP DQSPAMIIPS QMKRMVDDGS SSADNPTTVF EDVTLDPIER GLIRDWDAME DLLRYVVYTG LGWEEGNEGN ILFTDPLCTP
101: KAIREQLVQL MFETFNVSGF YASEQAVLSL YAVGRISGCT VDIGHGKIDI APVLEGAVQH IASKRFELGG TELTKLFAQE LGKTNPSMNL SMSDVEKLKE
201: QYANCAEDEI AYKKTQNCEI EQHTLPDGQV ISIGRERYSV GEALFQPSIL GLEEHGIVEQ LVRIISTVSS ENHRQLLENT VLCGGTTSMT GFESRFQKEA
301: NLCSSAIRPT LVKPPEYMPE NLGMYSAWVG GAILAKVVFP QNQHVTKADY DETGPSVVHR KCF

Arabidopsis Description

ARP7Actin-related protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8L4Y5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.