Factsheet for Bra039097.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra016738.1-P
Bra019815.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G27000.1	Bra016738.1-P	AT1G13180.1	17267444
AT3G27000.1	Bra019815.1-P	AT1G13180.1	17267444

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20066	Canola	cytosol	100.0	100.0
CDY00172	Canola	cytosol	99.74	99.74
AT3G27000.1	Thale cress	cytosol	98.97	98.97
Bra025243.1-P	Field mustard	cytosol	92.55	98.36
KRG94584	Soybean	cytosol	92.8	92.8
KRH06905	Soybean	cytosol	92.8	92.8
VIT_14s0068g01630.t01	Wine grape	cytosol	92.29	92.29
Solyc02g094320.2.1	Tomato	cytosol	90.23	90.23
GSMUA_AchrUn_...	Banana	cytosol	89.97	89.97
Zm00001d022558_P001	Maize	cytosol	89.72	89.72
EER99952	Sorghum	cytosol	89.46	89.46
TraesCS3D01G362400.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	86.63	86.63
PGSC0003DMT400052197	Potato	cytosol	86.38	84.21
TraesCS3A01G369400.1	Wheat	cytosol	86.38	84.0
TraesCS3B01G401300.2	Wheat	cytosol	86.12	80.53
HORVU4Hr1G007240.3	Barley	cytosol	85.35	70.79
Bra009081.1-P	Field mustard	cytosol	41.9	46.18
Bra003156.1-P	Field mustard	cytosol	24.42	46.12
Bra005178.1-P	Field mustard	cytosol	41.13	45.2
Bra014865.1-P	Field mustard	cytosol	43.7	45.09
Bra007025.1-P	Field mustard	cytosol	43.7	45.09
Bra006033.1-P	Field mustard	cytosol	43.7	45.09
Bra000010.1-P	Field mustard	cytosol	43.19	44.56
Bra034778.1-P	Field mustard	cytosol	43.19	44.56
Bra028615.1-P	Field mustard	cytosol	43.19	44.56
Bra017166.1-P	Field mustard	cytosol	42.93	44.3
Bra033819.1-P	Field mustard	cytosol	42.67	44.03
Bra018210.1-P	Field mustard	cytosol	42.67	44.03
Bra019486.1-P	Field mustard	cytosol	42.42	43.77
Bra022356.1-P	Field mustard	cytosol	35.99	43.34
Bra020319.1-P	Field mustard	cytosol	37.79	43.24
Bra006719.1-P	Field mustard	cytosol	36.76	43.07
Bra016895.1-P	Field mustard	cytosol	32.9	42.24
Bra037560.1-P	Field mustard	cytoskeleton, cytosol	37.28	41.08
Bra016738.1-P	Field mustard	cytosol	31.88	29.04
Bra019815.1-P	Field mustard	cytosol	31.36	28.57
Bra002571.1-P	Field mustard	nucleus	42.67	27.44
Bra003429.1-P	Field mustard	cytosol	24.42	26.39
Bra030818.1-P	Field mustard	cytosol	13.37	23.42
Bra007566.1-P	Field mustard	cytosol	17.74	21.04
Bra019816.1-P	Field mustard	nucleus	9.77	10.08

Protein Annotations

MapMan:20.2.2.1.1	Gene3D:3.30.420.40	Gene3D:3.90.640.10	InterPro:Actin	InterPro:Arp2	EnsemblPlantsGene:Bra039097
EnsemblPlants:Bra039097.1	EnsemblPlants:Bra039097.1-P	GO:GO:0000166	GO:GO:0000902	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005885
GO:GO:0007015	GO:GO:0008150	GO:GO:0009653	GO:GO:0009825	GO:GO:0009987	GO:GO:0010090
GO:GO:0016043	GO:GO:0016049	GO:GO:0030154	GO:GO:0034314	GO:GO:0040007	UniProt:M4FDC6
PFAM:PF00022	PRINTS:PR00190	PANTHER:PTHR11937	PANTHER:PTHR11937:SF149	SMART:SM00268	SUPFAM:SSF53067
UniParc:UPI0002541B26	:	:	:	:	:

Description

AT3G27000 (E=3e-229) ARP2, ATARP2, WRM | ARP2 (ACTIN RELATED PROTEIN 2); protein binding / structural constituent of cytoskeleton

Coordinates

chrA09:-:1169925..1172709

Molecular Weight (calculated)

44375.7 Da

IEP (calculated)

5.328

GRAVY (calculated)

-0.274

Length

389 amino acids

Sequence
(BLAST)

001: MDNKNVVVCD NGTGYVKCGF AGENFPTSVF PCVVGRPLLR YEESLMEQQV KDIVVGETCA ELRHQLDINY PVHNGIVQNW EDMEHVWDHA FYNELKINPS
101: DCKILLTDPP LNPSKNREKM IETMFEKYNF AGVFIQIQAV LTLYAQGLLT GLVIDSGDGV THVVPVVDGY SFPHLTKRMN VAGRHITAYL VDLLSRRGYA
201: MNKTADFETV REIKEKLCYI SYDYKREYQL GLETTILVKN YTLPDGRVIK VGTERFQAPE ALFTPELIDV EGDGMADMVF RCIQEMDIDN RMMLYQHIVL
301: SGGSTMYPGL PSRLEKEIQD RYLDTVLKGN KDGLKKLRLR IEDPPRRKHM VYLGGAVLAG IMKDAPEFWI NREDYMEEGI GCLNKMSQA

Best Arabidopsis Sequence Match ( AT3G27000.1 )
(BLAST)

001: MDNKNVVVCD NGTGYVKCGF AGENFPTSVF PCVVGRPLLR YEESLMEQQV KDIVVGETCS ELRHQLDINY PVHNGIVQNW DDMEHVWDHA FYNELKINPS
101: DCKILLTDPP LNPSKNREKM IETMFEKYNF AGVFIQIQAV LTLYAQGLLT GLVIDSGDGV THVVPVVDGY SFPHLTKRMN VAGRHITAYL VDLLSRRGYA
201: MNKTADFETV REIKEKLCYI SYDYKRESQL GLETTILVKN YTLPDGRVIK VGTERFQAPE ALFTPELIDV EGDGMADMVF RCIQEMDIDN RMMLYQHIVL
301: SGGSTMYPGL PSRLEKEIQD RYLDTVLKGN KDGLKKLRLR IEDPPRRKHM VYLGGAVLAG IMKDAPEFWI NREDYMEEGI NCLNKMSQA

Arabidopsis Description

ARP2Actin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSD6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.