Factsheet for Bra006719.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88698	Canola	cytosol	100.0	88.06
Bra018210.1-P	Field mustard	cytosol	100.0	88.06
Bra019486.1-P	Field mustard	cytosol	99.7	87.8
Bra033819.1-P	Field mustard	cytosol	99.4	87.53
Bra020319.1-P	Field mustard	cytosol	88.25	86.18
VIT_13s0019g01240.t01	Wine grape	cytosol	96.99	85.41
KRH10268	Soybean	mitochondrion, nucleus	96.99	85.41
KRH38098	Soybean	cytosol	96.69	85.15
KRH23061	Soybean	endoplasmic reticulum, mitochondrion, nucleus	96.39	84.88
Bra007025.1-P	Field mustard	cytosol	96.39	84.88
KRH71847	Soybean	endoplasmic reticulum, nucleus	96.39	84.88
Bra014865.1-P	Field mustard	cytosol	96.08	84.62
VIT_08s0007g06520.t01	Wine grape	cytosol	96.08	84.62
KRH01660	Soybean	mitochondrion, nucleus	96.08	84.62
KRG95386	Soybean	cytosol	96.08	84.62
KRH70465	Soybean	mitochondrion, nucleus	96.08	84.62
KRH67068	Soybean	endoplasmic reticulum, mitochondrion, nucleus	96.08	84.62
Bra000010.1-P	Field mustard	cytosol	96.08	84.62
VIT_06s0004g04570.t01	Wine grape	cytosol	95.78	84.57
KRH29804	Soybean	endoplasmic reticulum, mitochondrion, nucleus	95.78	84.35
Bra017166.1-P	Field mustard	cytosol	95.78	84.35
KRH56507	Soybean	endoplasmic reticulum, mitochondrion	95.78	84.35
Bra034778.1-P	Field mustard	cytosol	95.48	84.08
KRG93168	Soybean	mitochondrion, nucleus	95.48	84.08
GSMUA_AchrUn_...	Banana	plasma membrane	95.18	83.82
Bra005178.1-P	Field mustard	cytosol	88.86	83.33
Solyc10g086460.1.1	Tomato	unclear	93.98	82.76
Bra028615.1-P	Field mustard	cytosol	93.67	82.49
Bra006033.1-P	Field mustard	cytosol	93.67	82.49
PGSC0003DMT400049429	Potato	cytosol	93.67	82.49
PGSC0003DMT400023026	Potato	cytosol	93.07	81.96
Bra009081.1-P	Field mustard	cytosol	86.45	81.3
GSMUA_Achr10P...	Banana	cytosol	62.35	78.71
Bra022356.1-P	Field mustard	cytosol	75.9	78.02
GSMUA_Achr7P18630_001	Banana	cytosol	75.0	77.81
Solyc09g010750.1.1	Tomato	cytosol	40.36	74.86
KRH24799	Soybean	cytosol	90.96	73.66
Bra037560.1-P	Field mustard	cytoskeleton, cytosol	76.2	71.67
Bra003156.1-P	Field mustard	cytosol	42.17	67.96
Bra016895.1-P	Field mustard	cytosol	60.54	66.34
Bra002571.1-P	Field mustard	nucleus	99.7	54.71
Bra039097.1-P	Field mustard	cytosol	43.07	36.76
Bra025243.1-P	Field mustard	cytosol	40.06	36.34
Bra003429.1-P	Field mustard	cytosol	38.25	35.28
Bra016738.1-P	Field mustard	cytosol	38.55	29.98
Bra019815.1-P	Field mustard	cytosol	38.25	29.74
Bra007566.1-P	Field mustard	cytosol	28.01	28.35
Bra030818.1-P	Field mustard	cytosol	18.07	27.03
Bra019816.1-P	Field mustard	nucleus	12.65	11.14

Protein Annotations

MapMan:20.2.1	Gene3D:3.30.420.40	Gene3D:3.90.640.10	InterPro:Actin	InterPro:Actin/actin-like_CS	InterPro:Actin_CS
EnsemblPlantsGene:Bra006719	EnsemblPlants:Bra006719.1	EnsemblPlants:Bra006719.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	UniProt:M4CR78	PFAM:PF00022	PRINTS:PR00190	ScanProsite:PS00406	ScanProsite:PS00432
ScanProsite:PS01132	PANTHER:PTHR11937	PANTHER:PTHR11937:SF276	SMART:SM00268	SUPFAM:SSF53067	UniParc:UPI000254028E

Description

AT3G46520 (E=1e-191) ACT12 | ACT12 (ACTIN-12); structural constituent of cytoskeleton

Coordinates

chrA03:-:4785044..4786539

Molecular Weight (calculated)

37200.7 Da

IEP (calculated)

5.123

GRAVY (calculated)

-0.230

Length

332 amino acids

Sequence
(BLAST)

001: MVGMGQKDAY VGDEAQSKRG ILTLKYPIEH GIVNNWDDME KIWHHTFYNE LRVAPEEHPV LLTEAPLNPK ANREKMTQIM FETFNTPAMY VAIQAVLSLY
101: ASGRTTGIVL DSGDGVSHTV PIYEGYALPH AILRLDLAGR DLTDYLMKIL TERGYSFTTT AEREIVRDMK EKLSYIALDY EQELETSNTS SSVEKSFELP
201: DGQVITIGAE RFRCPEVLFQ PSMIGMENPG IHETTYNSIM KCDVDIRKDL YGNIVLSGGT TMFGGIGDRM SKEITALAPS SMKIKVVAPP ERKYSVWIGG
301: SILASLSTFQ QMWIAKAEYD ESGPSIVHRK CF

Best Arabidopsis Sequence Match ( AT3G12110.1 )
(BLAST)

001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDY LMKILTERGY
201: SFTTSAEREI VRDVKEKLAY IALDYEQEME TANTSSSVEK SYELPDGQVI TIGGERFRCP EVLFQPSLVG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF

Arabidopsis Description

ACT11Actin-11 [Source:UniProtKB/Swiss-Prot;Acc:P53496]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.