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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • nucleus 1
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytoskeleton, cytosol, mitochondrion, nucleus
BaCelLo:cytosol
EpiLoc:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr2P08220_001
GSMUA_Achr7P18630_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G37620.1 GSMUA_Achr11P... AT2G23420.1 21798944
AT2G37620.1 GSMUA_Achr2P08220_001 AT2G23420.1 21798944
AT2G37620.1 GSMUA_Achr10P... AT2G37620.1 21798944
AT2G37620.1 GSMUA_Achr7P18630_001 AT2G37620.1 21798944
AT2G37620.1 GSMUA_AchrUn_... AT2G37620.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr6P02480_001 Banana cytosol 98.86 87.54
GSMUA_Achr7P18630_001 Banana cytosol 99.62 81.88
GSMUA_Achr3P20240_001 Banana cytosol 88.97 78.0
GSMUA_Achr2P15150_001 Banana cytosol 98.1 73.93
GSMUA_Achr9P08850_001 Banana cytosol 96.2 72.49
GSMUA_Achr5P29190_001 Banana cytosol 95.44 72.13
GSMUA_Achr11P... Banana cytosol 95.44 71.92
GSMUA_Achr10P... Banana cytosol 88.59 70.82
GSMUA_AchrUn_... Banana plasma membrane 98.86 68.97
VIT_06s0004g04570.t01 Wine grape cytosol 98.48 68.88
GSMUA_Achr4P31250_001 Banana cytosol 98.1 68.44
AT2G37620.1 Thale cress cytosol 97.72 68.17
AT3G53750.2 Thale cress cytosol 97.72 68.17
KRH10268 Soybean mitochondrion, nucleus 97.72 68.17
KRG95386 Soybean cytosol 97.34 67.9
CDX76191 Canola cytosol 97.34 67.9
Bra014865.1-P Field mustard cytosol 97.34 67.9
KRH29804 Soybean endoplasmic reticulum, mitochondrion, nucleus 97.34 67.9
KRH38098 Soybean cytosol 97.34 67.9
VIT_08s0007g06520.t01 Wine grape cytosol 97.34 67.9
KRG93168 Soybean mitochondrion, nucleus 96.96 67.64
AT3G12110.1 Thale cress cytosol 96.96 67.64
KRH23061 Soybean endoplasmic reticulum, mitochondrion, nucleus 96.96 67.64
KRH56507 Soybean endoplasmic reticulum, mitochondrion 96.96 67.64
KRH67068 Soybean endoplasmic reticulum, mitochondrion, nucleus 96.96 67.64
KRH71847 Soybean endoplasmic reticulum, nucleus 96.96 67.64
VIT_13s0019g01240.t01 Wine grape cytosol 96.96 67.64
CDY30846 Canola cytosol 96.96 67.64
CDX91373 Canola cytosol 96.96 67.64
CDX78202 Canola cytosol 96.96 67.64
Bra000010.1-P Field mustard cytosol 96.96 67.64
CDX74944 Canola cytosol 96.96 67.64
Bra007025.1-P Field mustard cytosol 96.96 67.64
CDY07779 Canola cytosol 90.49 67.61
KRH01660 Soybean mitochondrion, nucleus 96.58 67.37
GSMUA_Achr3P02960_001 Banana cytosol 96.58 67.37
Bra034778.1-P Field mustard cytosol 96.58 67.37
Bra017166.1-P Field mustard cytosol 96.58 67.37
CDY01102 Canola cytosol 96.58 67.37
KRH70465 Soybean mitochondrion, nucleus 96.58 67.37
CDY08455 Canola cytosol 96.2 67.11
AT3G46520.2 Thale cress cytosol 96.2 67.11
GSMUA_Achr8P02660_001 Banana cytosol 96.2 67.11
GSMUA_Achr8P16150_001 Banana cytosol 96.2 67.11
CDX82985 Canola cytosol 96.2 67.11
Bra033819.1-P Field mustard cytosol 96.2 67.11
CDY53444 Canola cytosol 96.2 67.11
GSMUA_Achr9P03170_001 Banana cytosol 95.82 67.02
Bra019486.1-P Field mustard cytosol 95.82 66.84
GSMUA_Achr6P25350_001 Banana cytosol 95.82 66.84
CDX88698 Canola cytosol 95.82 66.84
CDX71119 Canola cytosol 95.82 66.84
Bra018210.1-P Field mustard cytosol 95.82 66.84
AT5G59370.2 Thale cress cytosol 95.82 66.84
PGSC0003DMT400023026 Potato cytosol 95.82 66.84
GSMUA_Achr10P... Banana cytosol 95.82 66.84
GSMUA_Achr2P16160_001 Banana cytosol 95.82 66.84
CDX99111 Canola cytosol 95.82 66.84
CDY21777 Canola cytosol 95.82 66.84
CDX86081 Canola cytosol 95.82 66.84
CDY38066 Canola cytosol 95.82 66.84
PGSC0003DMT400049429 Potato cytosol 95.06 66.31
GSMUA_Achr7P10410_001 Banana cytosol 95.06 66.31
Solyc10g086460.1.1 Tomato unclear 94.68 66.05
GSMUA_Achr1P05990_001 Banana plasma membrane 94.3 65.78
CDX73527 Canola cytosol 87.83 65.44
GSMUA_Achr1P20200_001 Banana cytosol 86.31 65.42
Bra005178.1-P Field mustard cytosol 87.83 65.25
GSMUA_Achr11P... Banana cytosol 93.54 65.25
Bra020319.1-P Field mustard cytosol 84.03 65.0
CDY48688 Canola cytosol 84.03 65.0
CDX79746 Canola cytosol 90.49 63.98
CDX94448 Canola cytosol 93.92 63.82
CDY65255 Canola cytosol 79.47 63.14
GSMUA_Achr10P... Banana cytosol 65.78 62.91
CDX93360 Canola cytosol 79.09 62.84
Bra006719.1-P Field mustard cytosol 78.71 62.35
GSMUA_Achr6P34320_001 Banana cytosol 54.75 59.02
KRH24799 Soybean cytosol 90.87 58.29
Bra003156.1-P Field mustard cytosol 42.59 54.37
GSMUA_Achr2P08030_001 Banana cytosol 71.1 53.43
Solyc09g010750.1.1 Tomato cytosol 34.6 50.84
CDY71336 Canola cytosol 47.53 45.45
CDX67573 Canola cytosol 48.67 42.11
Bra002571.1-P Field mustard nucleus 95.44 41.49
CDY33033 Canola nucleus 82.89 40.3
CDX80274 Canola nucleus 81.37 38.98
GSMUA_AchrUn_... Banana cytosol 41.83 28.28
GSMUA_Achr2P05970_001 Banana cytosol 19.01 28.25
GSMUA_AchrUn_... Banana endoplasmic reticulum 26.62 24.05
GSMUA_Achr8P01270_001 Banana cytosol 38.78 23.89
GSMUA_Achr9P07630_001 Banana cytosol 38.02 23.36
GSMUA_Achr6P21120_001 Banana cytosol 37.64 23.18
GSMUA_Achr8P16860_001 Banana endoplasmic reticulum 39.16 21.78
GSMUA_AchrUn_... Banana cytosol 31.18 18.85
GSMUA_Achr2P05960_001 Banana cytosol 20.53 17.65
Protein Annotations
EnsemblPlants:GSMUA_Achr10P29950_001EnsemblPlants:GSMUA_Achr10T29950_001EnsemblPlantsGene:GSMUA_Achr10G29950_001Gene3D:2.30.36.70Gene3D:3.30.420.40InterPro:Actin
InterPro:Actin_CSPANTHER:PTHR11937PANTHER:PTHR11937:SF355PFAM:PF00022PRINTS:PR00190ScanProsite:PS00406
ScanProsite:PS00432SMART:SM00268SUPFAM:SSF53067UniParc:UPI000296AB8CUniProt:M0RML9MapMan:35.1
Description
Actin-97 [Source:GMGC_GENE;Acc:GSMUA_Achr10G29950_001]
Coordinates
chr10:-:32250333..32253183
Molecular Weight (calculated)
28913.8 Da
IEP (calculated)
5.955
GRAVY (calculated)
-0.118
Length
263 amino acids
Sequence
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRMTQ
101: IMFETFNAPA MYVAIQAVLS LYASGRTTGI KLAYIALDYE QELETAKTNS SPSMIGMEAA GIHETTYNSI MKCDVDIRKD LYGNIVLSGG STMFTGIADR
201: MSKEITALAP SSMKIKVVAP PERKYSVWIG GSILASLSTF QQMWIAKAEY DESGPSIVHR KCF
Best Arabidopsis Sequence Match ( AT2G37620.1 )
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDIKEKLCY IALDYEQELE TAKTSSSVEK NYELPDGQVI TIGSERFRCP EVLYQPSMIG MENAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
Arabidopsis Description
ACT1Actin-3 [Source:UniProtKB/Swiss-Prot;Acc:P0CJ47]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.