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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • nucleus 1
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytoskeleton, cytosol, mitochondrion, nucleus
BaCelLo:cytosol
EpiLoc:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT2G37620.1 Thale cress cytosol 100.0 100.0
Bra014865.1-P Field mustard cytosol 99.73 99.73
CDX76191 Canola cytosol 99.73 99.73
Bra007025.1-P Field mustard cytosol 99.47 99.47
CDX78202 Canola cytosol 99.47 99.47
CDX73527 Canola cytosol 93.1 99.43
CDY30846 Canola cytosol 99.2 99.2
GSMUA_AchrUn_... Banana plasma membrane 98.14 98.14
GSMUA_Achr10P... Banana cytosol 68.17 97.72
KRH38098 Soybean cytosol 97.08 97.08
VIT_06s0004g04570.t01 Wine grape cytosol 96.82 97.07
KRH71847 Soybean endoplasmic reticulum, nucleus 96.82 96.82
AT3G46520.2 Thale cress cytosol 96.55 96.55
KRH10268 Soybean mitochondrion, nucleus 96.55 96.55
VIT_13s0019g01240.t01 Wine grape cytosol 96.29 96.29
KRH29804 Soybean endoplasmic reticulum, mitochondrion, nucleus 96.29 96.29
KRH56507 Soybean endoplasmic reticulum, mitochondrion 96.29 96.29
AT5G59370.2 Thale cress cytosol 96.29 96.29
VIT_08s0007g06520.t01 Wine grape cytosol 96.29 96.29
KRG93168 Soybean mitochondrion, nucleus 96.02 96.02
KRH70465 Soybean mitochondrion, nucleus 96.02 96.02
KRH67068 Soybean endoplasmic reticulum, mitochondrion, nucleus 96.02 96.02
KRH23061 Soybean endoplasmic reticulum, mitochondrion, nucleus 96.02 96.02
KRH01660 Soybean mitochondrion, nucleus 96.02 96.02
KRG95386 Soybean cytosol 96.02 96.02
AT3G12110.1 Thale cress cytosol 96.02 96.02
AT5G09810.1 Thale cress cytosol 95.76 95.76
PGSC0003DMT400023026 Potato cytosol 94.69 94.69
Solyc10g086460.1.1 Tomato unclear 93.9 93.9
PGSC0003DMT400049429 Potato cytosol 93.9 93.9
GSMUA_Achr7P18630_001 Banana cytosol 79.31 93.44
Bra003156.1-P Field mustard cytosol 50.93 93.2
AT1G49240.1 Thale cress cytosol 90.98 90.98
AT3G18780.3 Thale cress cytosol 90.72 90.72
Solyc09g010750.1.1 Tomato cytosol 41.64 87.71
KRH24799 Soybean cytosol 91.78 84.39
AT2G42100.1 Thale cress cytosol 83.55 83.33
CDY71336 Canola cytosol 58.09 79.64
AT2G42170.3 Thale cress cytosol 67.9 77.81
CDX67573 Canola cytosol 58.09 72.04
AT2G42090.1 Thale cress cytosol 69.23 71.31
AT3G27000.1 Thale cress cytosol 45.36 43.96
AT3G60830.1 Thale cress cytosol 36.87 38.29
AT1G18450.1 Thale cress cytosol 42.97 36.73
AT1G13180.1 Thale cress cytosol 38.2 33.72
AT3G33520.1 Thale cress cytosol 33.16 29.69
Protein Annotations
MapMan:20.2.1Gene3D:3.30.420.40Gene3D:3.90.640.10EntrezGene:818339EntrezGene:823805EntrezGene:824542
EntrezGene:836056UniProt:A0A178VSL1ProteinID:AAA32727.1ProteinID:AAA98562.1ProteinID:AAB39403.1ProteinID:AAB39405.1
ProteinID:AAC23632.2Symbol:ACT3ProteinID:AEC09426.1ProteinID:AEC09427.1ProteinID:AED97176.1ProteinID:AED97177.1
ProteinID:AEE78168.1ProteinID:AEE79138.1ProteinID:ANM62357.1ProteinID:ANM62358.1ProteinID:ANM64878.1ProteinID:ANM65018.1
ArrayExpress:AT3G53750EnsemblPlantsGene:AT3G53750RefSeq:AT3G53750TAIR:AT3G53750RefSeq:AT3G53750-TAIR-GEnsemblPlants:AT3G53750.2
EMBL:AY049293EMBL:AY074873EMBL:AY086557EMBL:AY088111EMBL:AY093784InterPro:Actin
InterPro:Actin/actin-like_CSInterPro:Actin_CSUnigene:At.23817ProteinID:BAA97473.1EMBL:BT002257EMBL:BT003847
EMBL:BT005073ProteinID:CAB62322.1ProteinID:CAB88337.1UniProt:F1LIM1GO:GO:0000166GO:GO:0003674
GO:GO:0005198GO:GO:0005200GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005576
GO:GO:0005618GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005739
GO:GO:0005829GO:GO:0005856GO:GO:0005886GO:GO:0007010GO:GO:0007275GO:GO:0008150
GO:GO:0009506GO:GO:0009536GO:GO:0009570GO:GO:0009653GO:GO:0009941GO:GO:0009987
GO:GO:0016020GO:GO:0016043GO:GO:0016049GO:GO:0030154GO:GO:0030312GO:GO:0040007
GO:GO:0048046GO:GO:0048589GO:GO:0048767RefSeq:NP_001031504.1RefSeq:NP_001078769.1RefSeq:NP_001324518.1
RefSeq:NP_001324519.1RefSeq:NP_001326881.1RefSeq:NP_001327017.1RefSeq:NP_190236.1RefSeq:NP_200745.1RefSeq:NP_566988.1
RefSeq:NP_850284.1ProteinID:OAP03473.1ProteinID:OAP09427.1UniProt:P0CJ46UniProt:P0CJ47PFAM:PF00022
PRINTS:PR00190ScanProsite:PS00406ScanProsite:PS00432ScanProsite:PS01132PANTHER:PTHR11937PANTHER:PTHR11937:SF276
SMART:SM00268SUPFAM:SSF53067EMBL:U39449EMBL:U39480UniParc:UPI0000001B19:
Description
ACT1Actin-3 [Source:UniProtKB/Swiss-Prot;Acc:P0CJ47]
Coordinates
chr3:+:19915257..19917641
Molecular Weight (calculated)
41800.2 Da
IEP (calculated)
5.162
GRAVY (calculated)
-0.203
Length
377 amino acids
Sequence
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDIKEKLCY IALDYEQELE TAKTSSSVEK NYELPDGQVI TIGSERFRCP EVLYQPSMIG MENAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.