Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G42100.1 | Thale cress | cytosol | 72.4 | 70.11 |
| AT2G42170.3 | Thale cress | cytosol | 62.84 | 69.91 |
| AT5G09810.1 | Thale cress | cytosol | 71.86 | 69.76 |
| AT3G12110.1 | Thale cress | cytosol | 71.58 | 69.5 |
| AT2G37620.1 | Thale cress | cytosol | 71.31 | 69.23 |
| AT3G46520.2 | Thale cress | cytosol | 71.31 | 69.23 |
| AT3G53750.2 | Thale cress | cytosol | 71.31 | 69.23 |
| AT1G49240.1 | Thale cress | cytosol | 71.04 | 68.97 |
| AT3G18780.3 | Thale cress | cytosol | 71.04 | 68.97 |
| AT5G59370.2 | Thale cress | cytosol | 71.04 | 68.97 |
| Bra016895.1-P | Field mustard | cytosol | 54.1 | 65.35 |
| CDY14813 | Canola | cytosol | 57.92 | 60.4 |
| CDY06885 | Canola | cytosol | 54.1 | 59.82 |
| AT3G27000.1 | Thale cress | cytosol | 39.34 | 37.02 |
| AT1G18450.1 | Thale cress | cytosol | 41.53 | 34.47 |
| AT3G60830.1 | Thale cress | cytosol | 33.33 | 33.61 |
| AT1G13180.1 | Thale cress | cytosol | 35.79 | 30.68 |
| AT3G33520.1 | Thale cress | cytosol | 33.61 | 29.22 |
Protein Annotations
| MapMan:20.2.1 | Gene3D:3.30.420.40 | Gene3D:3.90.640.10 | EntrezGene:818809 | ProteinID:AAB63535.1 | Symbol:ACT9 |
| ProteinID:AEC10069.1 | ArrayExpress:AT2G42090 | EnsemblPlantsGene:AT2G42090 | RefSeq:AT2G42090 | TAIR:AT2G42090 | RefSeq:AT2G42090-TAIR-G |
| EnsemblPlants:AT2G42090.1 | TAIR:AT2G42090.1 | InterPro:Actin | InterPro:Actin/actin-like_CS | InterPro:Actin_CS | Unigene:At.53098 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005856 | RefSeq:NP_181739.1 | UniProt:P93738 | PFAM:PF00022 |
| PRINTS:PR00190 | ScanProsite:PS00432 | ScanProsite:PS01132 | PANTHER:PTHR11937 | PANTHER:PTHR11937:SF266 | SMART:SM00268 |
| SUPFAM:SSF53067 | UniParc:UPI0000125432 | SEG:seg | : | : | : |
Description
ACT9Putative actin-9 [Source:UniProtKB/Swiss-Prot;Acc:P93738]
Coordinates
chr2:+:17556744..17558369
Molecular Weight (calculated)
41424.7 Da
IEP (calculated)
5.004
GRAVY (calculated)
-0.323
Length
366 amino acids
Sequence
(BLAST)
(BLAST)
001: MKPIVCDKGH GMVQAGFAGD EAPKVVFPCV VGRPRDGLNP NESYVGEEGH ANRDILTLKD PMEHGIVNNW DDMEKIWHYT FYNELRVDPE EHPVLLTEAP
101: YNPKANREKM TQIMFESFDV PAMYVSMQSV LYLYSSGRTT GVVLDLGERV SHTVPVYEGY ALPHGILRLD LGGRDLTDYL IEIMTERGYT YTTSAEREIV
201: RDIKEKLCYV ALDYEQEMEK TTKGWTIDKT YVLPDGQEIT IEAERFMCPE VLFQPSVIGK ESSGIHEATR NSILKCPVDT RRDMYGNILM TGGTTMLHGI
301: KERMTKELNA LVPSSMKVKV VVPPESECSV WIGGSILASL STFHQMWITK DEYEEHGAAI VHRKCV
101: YNPKANREKM TQIMFESFDV PAMYVSMQSV LYLYSSGRTT GVVLDLGERV SHTVPVYEGY ALPHGILRLD LGGRDLTDYL IEIMTERGYT YTTSAEREIV
201: RDIKEKLCYV ALDYEQEMEK TTKGWTIDKT YVLPDGQEIT IEAERFMCPE VLFQPSVIGK ESSGIHEATR NSILKCPVDT RRDMYGNILM TGGTTMLHGI
301: KERMTKELNA LVPSSMKVKV VVPPESECSV WIGGSILASL STFHQMWITK DEYEEHGAAI VHRKCV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.