Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030818.1-P | Field mustard | cytosol | 46.32 | 87.84 |
| CDY42404 | Canola | cytosol | 89.07 | 87.82 |
| KRH61849 | Soybean | cytosol, nucleus | 71.5 | 69.04 |
| VIT_11s0016g05490.t01 | Wine grape | cytosol | 69.36 | 67.44 |
| Solyc05g018600.2.1 | Tomato | cytosol | 68.41 | 65.75 |
| PGSC0003DMT400038724 | Potato | cytosol | 68.17 | 65.53 |
| TraesCS2B01G597500.1 | Wheat | cytosol | 65.32 | 63.95 |
| TraesCS2A01G585700.1 | Wheat | cytosol | 65.08 | 63.72 |
| TraesCS1B01G333100.1 | Wheat | cytosol | 65.08 | 63.72 |
| TraesCS2D01G600800.1 | Wheat | cytosol | 64.85 | 63.49 |
| HORVU0Hr1G005770.1 | Barley | cytosol | 64.37 | 63.02 |
| Os01t0269900-01 | Rice | cytosol | 63.66 | 62.47 |
| Zm00001d024059_P002 | Maize | cytosol | 63.66 | 62.33 |
| OQU79631 | Sorghum | cytosol | 63.42 | 61.81 |
| GSMUA_AchrUn_... | Banana | cytosol | 63.66 | 61.61 |
| AT2G42090.1 | Thale cress | cytosol | 29.22 | 33.61 |
| AT2G42100.1 | Thale cress | cytosol | 30.17 | 33.6 |
| AT2G42170.3 | Thale cress | cytosol | 26.13 | 33.43 |
| AT5G09810.1 | Thale cress | cytosol | 29.93 | 33.42 |
| AT3G53750.2 | Thale cress | cytosol | 29.69 | 33.16 |
| AT2G37620.1 | Thale cress | cytosol | 29.69 | 33.16 |
| AT3G12110.1 | Thale cress | cytosol | 29.69 | 33.16 |
| AT1G49240.1 | Thale cress | cytosol | 29.45 | 32.89 |
| AT3G18780.3 | Thale cress | cytosol | 29.45 | 32.89 |
| AT5G59370.2 | Thale cress | cytosol | 28.98 | 32.36 |
| AT3G46520.2 | Thale cress | cytosol | 28.98 | 32.36 |
| AT3G27000.1 | Thale cress | cytosol | 27.32 | 29.56 |
| AT1G18450.1 | Thale cress | cytosol | 27.08 | 25.85 |
| AT1G13180.1 | Thale cress | cytosol | 25.42 | 25.06 |
| AT3G60830.1 | Thale cress | cytosol | 21.14 | 24.52 |
Protein Annotations
| MapMan:12.4.4.4 | EntrezGene:823150 | UniProt:A0A178U6Y1 | ProteinID:AAF03459.1 | ProteinID:AAN77933.1 | ProteinID:AAN77934.1 |
| ProteinID:AAN77938.1 | ProteinID:AAN77939.1 | ProteinID:AAN77940.1 | ProteinID:AAN77943.1 | ProteinID:AAN77945.1 | ProteinID:AAN77946.1 |
| ProteinID:AAN77947.1 | ProteinID:AAN77949.1 | ProteinID:AAN77950.1 | ProteinID:AAN77955.1 | ProteinID:AAN77962.1 | ProteinID:AAN77965.1 |
| ProteinID:AAN77969.1 | ProteinID:AEE77716.1 | EMBL:AF507914 | ArrayExpress:AT3G33520 | EnsemblPlantsGene:AT3G33520 | RefSeq:AT3G33520 |
| TAIR:AT3G33520 | RefSeq:AT3G33520-TAIR-G | EnsemblPlants:AT3G33520.1 | TAIR:AT3G33520.1 | Symbol:ATARP6 | EMBL:AY050786 |
| EMBL:AY084321 | EMBL:AY150426 | InterPro:Actin | InterPro:Arp6 | Unigene:At.18479 | ProteinID:DAA00030.1 |
| GO:GO:0000003 | GO:GO:0003674 | GO:GO:0005198 | GO:GO:0005200 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006139 |
| GO:GO:0006325 | GO:GO:0006338 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0006970 |
| GO:GO:0007010 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008283 | GO:GO:0009058 |
| GO:GO:0009266 | GO:GO:0009628 | GO:GO:0009791 | GO:GO:0009845 | GO:GO:0009908 | GO:GO:0009910 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016569 | GO:GO:0030029 | RefSeq:NP_566861.1 | ProteinID:OAO89390.1 |
| PFAM:PF00022 | PO:PO:0000003 | PO:PO:0000013 | PO:PO:0000014 | PO:PO:0000017 | PO:PO:0000037 |
| PO:PO:0000229 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR11937 | PANTHER:PTHR11937:SF47 | UniProt:Q8LGE3 | SMART:SM00268 | SUPFAM:SSF53067 | UniParc:UPI000005EAAE |
| SEG:seg | : | : | : | : | : |
Description
ARP6SUF3 [Source:UniProtKB/TrEMBL;Acc:A0A178U6Y1]
Coordinates
chr3:-:14093656..14095588
Molecular Weight (calculated)
46946.4 Da
IEP (calculated)
6.510
GRAVY (calculated)
-0.131
Length
421 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNIVVLDNG GGLIKAGQGG ERDPTTVIPN CLYKPLSSKK FIHPSPLTTL SDEIDLTSAA VRRPIDRGYL INSDLQREIW SHLFTSLLHI APSSSSLLLT
101: EAPLSIPSVQ RTTDELVFED FGFSSLYIAH PQSLVHLYEA SRQPDSILSK TQCSLVVDCG FSFTHAVPVL HNFTLNHAIK RIDLGGKAFT NYLKELVSYR
201: SINVMDETFL VDDAKEKLCF VSLDLLRDLR LARNGNTLIK STYVLPDGVT HTKGYVKDPQ AAKRFLSLSE KESVVVMDKV GERKKADMNK NEIDLTNERF
301: LVPETLFQPA DLGMNQAGLA ECIVRAINSC HSYLQPVLYQ SIILTGGSTL FPQLKERLEG ELRPLVPDHF DVKITTQEDP ILGVWRGGSL LASSPDFESM
401: CVTKAEYEEL GSARCRRRFF H
101: EAPLSIPSVQ RTTDELVFED FGFSSLYIAH PQSLVHLYEA SRQPDSILSK TQCSLVVDCG FSFTHAVPVL HNFTLNHAIK RIDLGGKAFT NYLKELVSYR
201: SINVMDETFL VDDAKEKLCF VSLDLLRDLR LARNGNTLIK STYVLPDGVT HTKGYVKDPQ AAKRFLSLSE KESVVVMDKV GERKKADMNK NEIDLTNERF
301: LVPETLFQPA DLGMNQAGLA ECIVRAINSC HSYLQPVLYQ SIILTGGSTL FPQLKERLEG ELRPLVPDHF DVKITTQEDP ILGVWRGGSL LASSPDFESM
401: CVTKAEYEEL GSARCRRRFF H
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.