Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- nucleus 1
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY38066 | Canola | cytosol | 99.73 | 99.73 |
| CDY21777 | Canola | cytosol | 99.73 | 99.73 |
| Bra019486.1-P | Field mustard | cytosol | 99.73 | 99.73 |
| AT5G59370.2 | Thale cress | cytosol | 99.73 | 99.73 |
| CDX99111 | Canola | cytosol | 99.47 | 99.47 |
| CDX86081 | Canola | cytosol | 99.47 | 99.47 |
| Bra018210.1-P | Field mustard | cytosol | 99.47 | 99.47 |
| CDX82985 | Canola | cytosol | 99.2 | 99.2 |
| Bra033819.1-P | Field mustard | cytosol | 98.94 | 98.94 |
| KRH38098 | Soybean | cytosol | 97.35 | 97.35 |
| KRH10268 | Soybean | mitochondrion, nucleus | 97.35 | 97.35 |
| VIT_13s0019g01240.t01 | Wine grape | cytosol | 97.08 | 97.08 |
| KRH71847 | Soybean | endoplasmic reticulum, nucleus | 97.08 | 97.08 |
| KRH23061 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 96.82 | 96.82 |
| AT3G53750.2 | Thale cress | cytosol | 96.55 | 96.55 |
| KRH67068 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 96.55 | 96.55 |
| KRH29804 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 96.55 | 96.55 |
| AT2G37620.1 | Thale cress | cytosol | 96.55 | 96.55 |
| KRG95386 | Soybean | cytosol | 96.55 | 96.55 |
| VIT_08s0007g06520.t01 | Wine grape | cytosol | 96.29 | 96.29 |
| KRH70465 | Soybean | mitochondrion, nucleus | 96.29 | 96.29 |
| KRH56507 | Soybean | endoplasmic reticulum, mitochondrion | 96.29 | 96.29 |
| KRH01660 | Soybean | mitochondrion, nucleus | 96.29 | 96.29 |
| VIT_06s0004g04570.t01 | Wine grape | cytosol | 96.02 | 96.28 |
| GSMUA_Achr10P... | Banana | cytosol | 67.11 | 96.2 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 96.02 | 96.02 |
| KRG93168 | Soybean | mitochondrion, nucleus | 96.02 | 96.02 |
| AT3G12110.1 | Thale cress | cytosol | 95.76 | 95.76 |
| AT5G09810.1 | Thale cress | cytosol | 95.23 | 95.23 |
| Solyc10g086460.1.1 | Tomato | unclear | 94.69 | 94.69 |
| PGSC0003DMT400049429 | Potato | cytosol | 94.43 | 94.43 |
| PGSC0003DMT400023026 | Potato | cytosol | 93.37 | 93.37 |
| GSMUA_Achr7P18630_001 | Banana | cytosol | 78.25 | 92.19 |
| AT1G49240.1 | Thale cress | cytosol | 90.98 | 90.98 |
| AT3G18780.3 | Thale cress | cytosol | 90.72 | 90.72 |
| Solyc09g010750.1.1 | Tomato | cytosol | 40.32 | 84.92 |
| KRH24799 | Soybean | cytosol | 92.31 | 84.88 |
| AT2G42100.1 | Thale cress | cytosol | 82.23 | 82.01 |
| AT2G42170.3 | Thale cress | cytosol | 67.9 | 77.81 |
| AT2G42090.1 | Thale cress | cytosol | 69.23 | 71.31 |
| AT3G27000.1 | Thale cress | cytosol | 44.03 | 42.67 |
| AT3G60830.1 | Thale cress | cytosol | 36.87 | 38.29 |
| AT1G18450.1 | Thale cress | cytosol | 42.97 | 36.73 |
| AT1G13180.1 | Thale cress | cytosol | 38.46 | 33.96 |
| AT3G33520.1 | Thale cress | cytosol | 32.36 | 28.98 |
Protein Annotations
| MapMan:20.2.1 | Gene3D:3.30.420.40 | Gene3D:3.90.640.10 | EntrezGene:823805 | ProteinID:AAB39405.1 | Symbol:ACT12 |
| ProteinID:AEE78168.1 | ProteinID:ANM65018.1 | ArrayExpress:AT3G46520 | EnsemblPlantsGene:AT3G46520 | RefSeq:AT3G46520 | TAIR:AT3G46520 |
| RefSeq:AT3G46520-TAIR-G | EnsemblPlants:AT3G46520.2 | InterPro:Actin | InterPro:Actin/actin-like_CS | InterPro:Actin_CS | EMBL:BT003847 |
| EMBL:BT005073 | ProteinID:CAB62322.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005198 | GO:GO:0005200 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005856 | GO:GO:0007010 | GO:GO:0008150 | GO:GO:0009536 | GO:GO:0009570 |
| GO:GO:0009941 | GO:GO:0009987 | GO:GO:0016043 | RefSeq:NP_001327017.1 | RefSeq:NP_190236.1 | UniProt:P53497 |
| PFAM:PF00022 | PRINTS:PR00190 | ScanProsite:PS00406 | ScanProsite:PS00432 | ScanProsite:PS01132 | PANTHER:PTHR11937 |
| PANTHER:PTHR11937:SF366 | SMART:SM00268 | SUPFAM:SSF53067 | UniParc:UPI000000C19C | SEG:seg | : |
Description
ACT12Actin-12 [Source:UniProtKB/Swiss-Prot;Acc:P53497]
Coordinates
chr3:+:17128211..17131466
Molecular Weight (calculated)
41797.2 Da
IEP (calculated)
5.289
GRAVY (calculated)
-0.222
Length
377 amino acids
Sequence
(BLAST)
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDH LMKILTERGY
201: SFTTTAEREI VRDMKEKLSY IALDYEQELE TSKTSSSVEK SFELPDGQVI TIGAERFRCP EVLFQPSMIG MENPGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFGG IGDRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDH LMKILTERGY
201: SFTTTAEREI VRDMKEKLSY IALDYEQELE TSKTSSSVEK SFELPDGQVI TIGAERFRCP EVLFQPSMIG MENPGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFGG IGDRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.