Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- nucleus 1
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G53750.2 | Thale cress | cytosol | 100.0 | 100.0 |
| Bra000010.1-P | Field mustard | cytosol | 98.67 | 98.67 |
| CDY65255 | Canola | cytosol | 86.47 | 98.49 |
| Bra017166.1-P | Field mustard | cytosol | 98.41 | 98.41 |
| CDY07779 | Canola | cytosol | 91.78 | 98.3 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 98.14 | 98.14 |
| CDX93360 | Canola | cytosol | 85.94 | 97.89 |
| CDX91373 | Canola | cytosol | 97.88 | 97.88 |
| CDX74944 | Canola | cytosol | 97.88 | 97.88 |
| GSMUA_Achr10P... | Banana | cytosol | 68.17 | 97.72 |
| Bra005178.1-P | Field mustard | cytosol | 91.25 | 97.18 |
| KRH38098 | Soybean | cytosol | 97.08 | 97.08 |
| VIT_06s0004g04570.t01 | Wine grape | cytosol | 96.82 | 97.07 |
| KRH71847 | Soybean | endoplasmic reticulum, nucleus | 96.82 | 96.82 |
| AT3G46520.2 | Thale cress | cytosol | 96.55 | 96.55 |
| KRH10268 | Soybean | mitochondrion, nucleus | 96.55 | 96.55 |
| VIT_13s0019g01240.t01 | Wine grape | cytosol | 96.29 | 96.29 |
| KRH29804 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 96.29 | 96.29 |
| KRH56507 | Soybean | endoplasmic reticulum, mitochondrion | 96.29 | 96.29 |
| VIT_08s0007g06520.t01 | Wine grape | cytosol | 96.29 | 96.29 |
| AT5G59370.2 | Thale cress | cytosol | 96.29 | 96.29 |
| KRH70465 | Soybean | mitochondrion, nucleus | 96.02 | 96.02 |
| KRH67068 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 96.02 | 96.02 |
| AT3G12110.1 | Thale cress | cytosol | 96.02 | 96.02 |
| KRH23061 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 96.02 | 96.02 |
| KRH01660 | Soybean | mitochondrion, nucleus | 96.02 | 96.02 |
| KRG95386 | Soybean | cytosol | 96.02 | 96.02 |
| KRG93168 | Soybean | mitochondrion, nucleus | 96.02 | 96.02 |
| AT5G09810.1 | Thale cress | cytosol | 95.76 | 95.76 |
| PGSC0003DMT400023026 | Potato | cytosol | 94.69 | 94.69 |
| Solyc10g086460.1.1 | Tomato | unclear | 93.9 | 93.9 |
| PGSC0003DMT400049429 | Potato | cytosol | 93.9 | 93.9 |
| GSMUA_Achr7P18630_001 | Banana | cytosol | 79.31 | 93.44 |
| CDX94448 | Canola | cytosol | 95.76 | 93.28 |
| CDX79746 | Canola | cytosol | 91.78 | 93.01 |
| AT1G49240.1 | Thale cress | cytosol | 90.98 | 90.98 |
| AT3G18780.3 | Thale cress | cytosol | 90.72 | 90.72 |
| Solyc09g010750.1.1 | Tomato | cytosol | 41.64 | 87.71 |
| KRH24799 | Soybean | cytosol | 91.78 | 84.39 |
| AT2G42100.1 | Thale cress | cytosol | 83.55 | 83.33 |
| AT2G42170.3 | Thale cress | cytosol | 67.9 | 77.81 |
| AT2G42090.1 | Thale cress | cytosol | 69.23 | 71.31 |
| AT3G27000.1 | Thale cress | cytosol | 45.36 | 43.96 |
| AT3G60830.1 | Thale cress | cytosol | 36.87 | 38.29 |
| AT1G18450.1 | Thale cress | cytosol | 42.97 | 36.73 |
| AT1G13180.1 | Thale cress | cytosol | 38.2 | 33.72 |
| AT3G33520.1 | Thale cress | cytosol | 33.16 | 29.69 |
Protein Annotations
| MapMan:20.2.1 | Gene3D:3.30.420.40 | Gene3D:3.90.640.10 | EntrezGene:818339 | EntrezGene:824542 | EntrezGene:836056 |
| UniProt:A0A178VSL1 | ProteinID:AAA32727.1 | ProteinID:AAA98562.1 | ProteinID:AAC23632.2 | Symbol:ACT1 | ProteinID:AEC09426.1 |
| ProteinID:AEC09427.1 | ProteinID:AEE79138.1 | ProteinID:ANM62357.1 | ProteinID:ANM62358.1 | ProteinID:ANM64878.1 | ArrayExpress:AT2G37620 |
| EnsemblPlantsGene:AT2G37620 | RefSeq:AT2G37620 | TAIR:AT2G37620 | RefSeq:AT2G37620-TAIR-G | EnsemblPlants:AT2G37620.1 | TAIR:AT2G37620.1 |
| EMBL:AY049293 | EMBL:AY074873 | EMBL:AY086557 | EMBL:AY093784 | InterPro:Actin | InterPro:Actin/actin-like_CS |
| InterPro:Actin_CS | EMBL:BT002257 | ProteinID:CAB88337.1 | UniProt:F1LIM1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005198 | GO:GO:0005200 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0005856 | GO:GO:0005886 | GO:GO:0007010 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009506 |
| GO:GO:0009653 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0030154 |
| GO:GO:0030312 | GO:GO:0040007 | GO:GO:0048046 | GO:GO:0048589 | GO:GO:0048767 | RefSeq:NP_001031504.1 |
| RefSeq:NP_001324518.1 | RefSeq:NP_001324519.1 | RefSeq:NP_001326881.1 | RefSeq:NP_566988.1 | RefSeq:NP_850284.1 | ProteinID:OAP03473.1 |
| ProteinID:OAP09427.1 | UniProt:P0CJ46 | UniProt:P0CJ47 | PFAM:PF00022 | PO:PO:0000005 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0005020 | PO:PO:0020003 | PO:PO:0025195 | PO:PO:0025281 |
| PRINTS:PR00190 | ScanProsite:PS00406 | ScanProsite:PS00432 | ScanProsite:PS01132 | PANTHER:PTHR11937 | PANTHER:PTHR11937:SF276 |
| SMART:SM00268 | SUPFAM:SSF53067 | EMBL:U39449 | EMBL:U39480 | UniParc:UPI0000001B19 | : |
Description
ACT1Actin-3 [Source:UniProtKB/Swiss-Prot;Acc:P0CJ47]
Coordinates
chr2:+:15778941..15781561
Molecular Weight (calculated)
41800.2 Da
IEP (calculated)
5.162
GRAVY (calculated)
-0.203
Length
377 amino acids
Sequence
(BLAST)
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDIKEKLCY IALDYEQELE TAKTSSSVEK NYELPDGQVI TIGSERFRCP EVLYQPSMIG MENAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDIKEKLCY IALDYEQELE TAKTSSSVEK NYELPDGQVI TIGSERFRCP EVLYQPSMIG MENAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.