Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20066 | Canola | cytosol | 98.97 | 98.97 |
| Bra039097.1-P | Field mustard | cytosol | 98.97 | 98.97 |
| CDY00172 | Canola | cytosol | 98.71 | 98.71 |
| Bra025243.1-P | Field mustard | cytosol | 91.77 | 97.54 |
| CDY13674 | Canola | cytosol | 97.69 | 96.2 |
| CDY52404 | Canola | cytosol | 97.43 | 95.95 |
| KRH06905 | Soybean | cytosol | 92.55 | 92.55 |
| KRG94584 | Soybean | cytosol | 92.55 | 92.55 |
| VIT_14s0068g01630.t01 | Wine grape | cytosol | 92.03 | 92.03 |
| Solyc02g094320.2.1 | Tomato | cytosol | 90.23 | 90.23 |
| GSMUA_AchrUn_... | Banana | cytosol | 89.72 | 89.72 |
| Zm00001d022558_P001 | Maize | cytosol | 89.46 | 89.46 |
| EER99952 | Sorghum | cytosol | 89.2 | 89.2 |
| TraesCS3D01G362400.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 86.38 | 86.38 |
| PGSC0003DMT400052197 | Potato | cytosol | 86.38 | 84.21 |
| TraesCS3A01G369400.1 | Wheat | cytosol | 86.12 | 83.75 |
| TraesCS3B01G401300.2 | Wheat | cytosol | 85.86 | 80.29 |
| HORVU4Hr1G007240.3 | Barley | cytosol | 85.09 | 70.58 |
| AT5G09810.1 | Thale cress | cytosol | 43.96 | 45.36 |
| AT3G53750.2 | Thale cress | cytosol | 43.96 | 45.36 |
| AT2G37620.1 | Thale cress | cytosol | 43.96 | 45.36 |
| AT2G42100.1 | Thale cress | cytosol | 43.7 | 44.97 |
| AT3G12110.1 | Thale cress | cytosol | 43.19 | 44.56 |
| AT3G18780.3 | Thale cress | cytosol | 42.93 | 44.3 |
| AT1G49240.1 | Thale cress | cytosol | 42.93 | 44.3 |
| AT3G46520.2 | Thale cress | cytosol | 42.67 | 44.03 |
| AT5G59370.2 | Thale cress | cytosol | 42.42 | 43.77 |
| AT2G42170.3 | Thale cress | cytosol | 34.7 | 41.03 |
| AT2G42090.1 | Thale cress | cytosol | 37.02 | 39.34 |
| AT1G13180.1 | Thale cress | cytosol | 31.88 | 29.04 |
| AT1G18450.1 | Thale cress | cytosol | 31.11 | 27.44 |
| AT3G33520.1 | Thale cress | cytosol | 29.56 | 27.32 |
| AT3G60830.1 | Thale cress | cytosol | 25.19 | 27.0 |
Protein Annotations
| MapMan:20.2.2.1.1 | Gene3D:3.30.420.40 | Gene3D:3.90.640.10 | EntrezGene:822317 | UniProt:A0A178V6E1 | ProteinID:AAC69601.1 |
| ProteinID:AEE77253.1 | EMBL:AF507910 | Symbol:ARP2 | ArrayExpress:AT3G27000 | EnsemblPlantsGene:AT3G27000 | RefSeq:AT3G27000 |
| TAIR:AT3G27000 | RefSeq:AT3G27000-TAIR-G | EnsemblPlants:AT3G27000.1 | TAIR:AT3G27000.1 | InterPro:Actin | InterPro:Arp2 |
| Unigene:At.37122 | ProteinID:BAB01081.1 | ProteinID:DAA00034.1 | GO:GO:0000166 | GO:GO:0000902 | GO:GO:0003674 |
| GO:GO:0003779 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005856 | GO:GO:0005885 | GO:GO:0007015 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009825 | GO:GO:0009987 | GO:GO:0010090 | GO:GO:0016043 |
| GO:GO:0016049 | GO:GO:0030029 | GO:GO:0030036 | GO:GO:0030154 | GO:GO:0034314 | GO:GO:0040007 |
| RefSeq:NP_189336.1 | ProteinID:OAP01809.1 | PFAM:PF00022 | PO:PO:0000079 | PO:PO:0000084 | PO:PO:0000293 |
| PO:PO:0007131 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009025 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0020030 | PO:PO:0025281 | PRINTS:PR00190 | PANTHER:PTHR11937 | PANTHER:PTHR11937:SF149 | UniProt:Q9LSD6 |
| SMART:SM00268 | SUPFAM:SSF53067 | UniParc:UPI00000A7528 | : | : | : |
Description
ARP2Actin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSD6]
Coordinates
chr3:-:9952479..9955982
Molecular Weight (calculated)
44358.6 Da
IEP (calculated)
5.325
GRAVY (calculated)
-0.287
Length
389 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNKNVVVCD NGTGYVKCGF AGENFPTSVF PCVVGRPLLR YEESLMEQQV KDIVVGETCS ELRHQLDINY PVHNGIVQNW DDMEHVWDHA FYNELKINPS
101: DCKILLTDPP LNPSKNREKM IETMFEKYNF AGVFIQIQAV LTLYAQGLLT GLVIDSGDGV THVVPVVDGY SFPHLTKRMN VAGRHITAYL VDLLSRRGYA
201: MNKTADFETV REIKEKLCYI SYDYKRESQL GLETTILVKN YTLPDGRVIK VGTERFQAPE ALFTPELIDV EGDGMADMVF RCIQEMDIDN RMMLYQHIVL
301: SGGSTMYPGL PSRLEKEIQD RYLDTVLKGN KDGLKKLRLR IEDPPRRKHM VYLGGAVLAG IMKDAPEFWI NREDYMEEGI NCLNKMSQA
101: DCKILLTDPP LNPSKNREKM IETMFEKYNF AGVFIQIQAV LTLYAQGLLT GLVIDSGDGV THVVPVVDGY SFPHLTKRMN VAGRHITAYL VDLLSRRGYA
201: MNKTADFETV REIKEKLCYI SYDYKRESQL GLETTILVKN YTLPDGRVIK VGTERFQAPE ALFTPELIDV EGDGMADMVF RCIQEMDIDN RMMLYQHIVL
301: SGGSTMYPGL PSRLEKEIQD RYLDTVLKGN KDGLKKLRLR IEDPPRRKHM VYLGGAVLAG IMKDAPEFWI NREDYMEEGI NCLNKMSQA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.