Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G12110.1 | Thale cress | cytosol | 83.86 | 84.08 |
| AT2G37620.1 | Thale cress | cytosol | 83.33 | 83.55 |
| AT3G53750.2 | Thale cress | cytosol | 83.33 | 83.55 |
| AT1G49240.1 | Thale cress | cytosol | 82.8 | 83.02 |
| AT5G09810.1 | Thale cress | cytosol | 82.8 | 83.02 |
| AT2G42170.3 | Thale cress | cytosol | 72.22 | 82.98 |
| AT3G18780.3 | Thale cress | cytosol | 82.54 | 82.76 |
| AT3G46520.2 | Thale cress | cytosol | 82.01 | 82.23 |
| AT5G59370.2 | Thale cress | cytosol | 81.75 | 81.96 |
| Bra016895.1-P | Field mustard | cytosol | 61.38 | 76.57 |
| AT2G42090.1 | Thale cress | cytosol | 70.11 | 72.4 |
| CDY14813 | Canola | cytosol | 66.4 | 71.51 |
| CDY06885 | Canola | cytosol | 61.64 | 70.39 |
| AT3G27000.1 | Thale cress | cytosol | 44.97 | 43.7 |
| AT3G60830.1 | Thale cress | cytosol | 34.66 | 36.09 |
| AT1G18450.1 | Thale cress | cytosol | 41.27 | 35.37 |
| AT1G13180.1 | Thale cress | cytosol | 37.57 | 33.26 |
| AT3G33520.1 | Thale cress | cytosol | 33.6 | 30.17 |
Protein Annotations
| MapMan:20.2.1 | Gene3D:3.30.420.40 | Gene3D:3.90.640.10 | EntrezGene:818810 | UniProt:A0A178VQF8 | ProteinID:AAF18605.2 |
| ProteinID:AAM15522.1 | ProteinID:AEC10070.1 | ArrayExpress:AT2G42100 | EnsemblPlantsGene:AT2G42100 | RefSeq:AT2G42100 | TAIR:AT2G42100 |
| RefSeq:AT2G42100-TAIR-G | EnsemblPlants:AT2G42100.1 | TAIR:AT2G42100.1 | InterPro:Actin | InterPro:Actin/actin-like_CS | InterPro:Actin_CS |
| Unigene:At.53099 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005856 | GO:GO:0008150 | RefSeq:NP_181740.1 |
| ProteinID:OAP08024.1 | PFAM:PF00022 | PRINTS:PR00190 | ScanProsite:PS00406 | ScanProsite:PS00432 | ScanProsite:PS01132 |
| PANTHER:PTHR11937 | PANTHER:PTHR11937:SF266 | UniProt:Q8RYC2 | SMART:SM00268 | SUPFAM:SSF53067 | UniParc:UPI000012541E |
Description
ACT5Putative actin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q8RYC2]
Coordinates
chr2:+:17560211..17561945
Molecular Weight (calculated)
42119.6 Da
IEP (calculated)
4.983
GRAVY (calculated)
-0.188
Length
378 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDLGDESVA IVCDNGTGMV KAGFAGDDAP RAVFPSVVGR PRHRGVMVGM DEKDTFVGDE AQARRGILSL KYPIEHGVVS NWDDMEKIWH HTFYNELRLE
101: PEEHPILLTE APLNPKVNRE KMTQIMFESF AFPSMYIGIQ AVLSLYSSGR TTGIVLDSGD GVSHTVPIYE GYALPHAILR LDLAGRDLTE YLTKIMMERG
201: YTYTTSAERE IVRDIKEKLC YIAVDYEQEM EKATTSSAID RTYELPDGQV ITIGAERFRC PEVLFQTSLI GMETSGIHET TYNSIMKCDV DIRKDLYGNI
301: VLSGGTTMFP GIADRMNKEI NALAPPSMKI KVVAPPERKY SVWVGGSILA SLSSFAPMWI TKAEYDEQGG AIVHRKCF
101: PEEHPILLTE APLNPKVNRE KMTQIMFESF AFPSMYIGIQ AVLSLYSSGR TTGIVLDSGD GVSHTVPIYE GYALPHAILR LDLAGRDLTE YLTKIMMERG
201: YTYTTSAERE IVRDIKEKLC YIAVDYEQEM EKATTSSAID RTYELPDGQV ITIGAERFRC PEVLFQTSLI GMETSGIHET TYNSIMKCDV DIRKDLYGNI
301: VLSGGTTMFP GIADRMNKEI NALAPPSMKI KVVAPPERKY SVWVGGSILA SLSSFAPMWI TKAEYDEQGG AIVHRKCF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.