Factsheet for AT3G18780.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18545	Canola	cytosol	100.0	100.0
AT1G49240.1	Thale cress	cytosol	99.73	99.73
Bra022356.1-P	Field mustard	cytosol	84.88	99.07
KRH53856	Soybean	endoplasmic reticulum, mitochondrion	81.17	92.17
GSMUA_Achr7P10410_001	Banana	cytosol	91.78	91.78
PGSC0003DMT400047481	Potato	cytosol	91.78	91.78
KRH64098	Soybean	cytosol	91.78	91.78
Solyc03g078400.2.1	Tomato	nucleus, plastid	91.78	91.78
EES08028	Sorghum	cytosol	91.78	91.78
PGSC0003DMT400010174	Potato	cytosol	91.78	91.78
Solyc11g005330.1.1	Tomato	nucleus	91.78	91.78
AT5G09810.1	Thale cress	cytosol	91.78	91.78
GSMUA_Achr9P03170_001	Banana	cytosol	91.51	91.76
Os05t0106600-01	Rice	nucleus	91.51	91.51
HORVU5Hr1G117900.1	Barley	cytosol	91.51	91.51
KRH59535	Soybean	cytosol	91.51	91.51
GSMUA_Achr6P25350_001	Banana	cytosol	91.51	91.51
KRH43389	Soybean	cytosol	91.51	91.51
Zm00001d053177_P004	Maize	cytosol	91.51	91.51
TraesCS5D01G516200.1	Wheat	cytosol	91.51	91.51
TraesCS5B01G124100.1	Wheat	cytosol	91.51	91.51
AT3G12110.1	Thale cress	cytosol	91.51	91.51
TraesCS5B01G516100.1	Wheat	cytosol	91.51	91.51
GSMUA_Achr9P08850_001	Banana	cytosol	84.62	91.4
Os11t0163100-01	Rice	nucleus, plasma membrane, plastid	91.25	91.25
KXG23031	Sorghum	cytosol	91.25	91.25
GSMUA_Achr2P16160_001	Banana	cytosol	91.25	91.25
GSMUA_Achr5P29190_001	Banana	cytosol	84.08	91.09
TraesCS4A01G356100.2	Wheat	cytosol	91.51	91.03
GSMUA_Achr6P34320_001	Banana	cytosol	58.89	90.98
TraesCS1B01G024500.1	Wheat	golgi, nucleus	90.98	90.98
GSMUA_Achr8P02660_001	Banana	cytosol	90.98	90.98
Os01t0964133-01	Rice	plasma membrane	90.98	90.98
GSMUA_Achr10P...	Banana	cytosol	90.98	90.98
TraesCS1D01G020000.1	Wheat	cytosol	90.98	90.98
EER90564	Sorghum	cytosol	90.98	90.98
Zm00001d011086_P005	Maize	cytosol	90.72	90.72
Zm00001d035720_P002	Maize	cytosol	90.72	90.72
KXG21029	Sorghum	cytosol	90.72	90.72
AT2G37620.1	Thale cress	cytosol	90.72	90.72
GSMUA_Achr8P16150_001	Banana	cytosol	90.72	90.72
GSMUA_Achr3P02960_001	Banana	cytosol	90.72	90.72
AT3G53750.2	Thale cress	cytosol	90.72	90.72
AT3G46520.2	Thale cress	cytosol	90.72	90.72
GSMUA_Achr11P...	Banana	cytosol	90.72	90.72
Zm00001d019635_P001	Maize	cytosol	33.16	90.58
GSMUA_Achr11P...	Banana	cytosol	83.82	90.54
Os03t0836000-01	Rice	plasma membrane, plastid	90.45	90.45
AT5G59370.2	Thale cress	cytosol	90.45	90.45
Zm00001d012277_P001	Maize	cytosol	90.19	90.43
Bra037560.1-P	Field mustard	cytoskeleton, cytosol	84.62	90.37
EES01810	Sorghum	cytosol	89.66	89.89
Zm00001d042731_P002	Maize	extracellular, plasma membrane, plastid	88.86	89.1
TraesCS5D01G132200.1	Wheat	golgi	87.53	88.95
Zm00001d035722_P007	Maize	plasma membrane	90.72	88.83
TraesCS1D01G274400.1	Wheat	cytosol	88.59	88.83
HORVU1Hr1G074350.1	Barley	cytosol	88.59	88.83
TraesCS1B01G283900.1	Wheat	cytosol	88.59	88.83
TraesCS1A01G274400.1	Wheat	golgi	88.59	88.83
Os05t0438800-01	Rice	plasma membrane, plastid	88.59	88.83
EES19603	Sorghum	cytosol	88.06	88.3
Zm00001d034761_P002	Maize	cytosol	90.98	87.5
Zm00001d010159_P002	Maize	extracellular, plasma membrane	87.27	87.5
Zm00001d016605_P001	Maize	cytosol	36.6	87.34
TraesCS5A01G124300.2	Wheat	golgi	91.51	84.35
TraesCS1A01G020500.2	Wheat	cytosol	90.98	84.28
HORVU1Hr1G002840.6	Barley	plasma membrane	90.98	84.28
Zm00001d016508_P001	Maize	cytosol	30.24	82.61
GSMUA_Achr10P...	Banana	cytosol	60.21	82.55
AT2G42100.1	Thale cress	cytosol	82.76	82.54
Zm00001d008746_P001	Maize	cytosol	59.42	81.45
KXG21030	Sorghum	cytosol	81.96	79.43
GSMUA_Achr2P08030_001	Banana	cytosol	73.74	79.43
Zm00001d019396_P001	Maize	cytosol	35.28	79.17
AT2G42170.3	Thale cress	cytosol	68.17	78.12
Zm00001d007792_P001	Maize	cytosol	52.79	75.38
Zm00001d011087_P001	Maize	plastid	90.72	75.33
VIT_04s0044g00580.t01	Wine grape	extracellular	91.78	75.22
Zm00001d003298_P001	Maize	cytosol	50.13	71.86
HORVU5Hr1G039850.3	Barley	mitochondrion	88.33	71.61
AT2G42090.1	Thale cress	cytosol	68.97	71.04
Zm00001d004087_P001	Maize	cytosol	40.05	69.91
Os01t0866100-01	Rice	plasma membrane	36.87	68.47
Zm00001d004855_P002	Maize	cytoskeleton, cytosol, nucleus	90.72	57.97
AT3G27000.1	Thale cress	cytosol	44.3	42.93
AT1G18450.1	Thale cress	cytosol	43.5	37.19
AT3G60830.1	Thale cress	cytosol	35.54	36.91
Zm00001d034421_P004	Maize	plastid	44.3	35.68
AT1G13180.1	Thale cress	cytosol	36.87	32.55
AT3G33520.1	Thale cress	cytosol	32.89	29.45

Protein Annotations

MapMan:20.2.1	Gene3D:3.30.420.40	Gene3D:3.90.640.10	EntrezGene:821411	UniProt:A0A178VJY0	ProteinID:AAB37098.1
Symbol:ACT2	ProteinID:AEE76148.1	EMBL:AF428330	EMBL:AK230311	EMBL:AK317305	ProteinID:ANM65915.1
ArrayExpress:AT3G18780	EnsemblPlantsGene:AT3G18780	RefSeq:AT3G18780	TAIR:AT3G18780	RefSeq:AT3G18780-TAIR-G	EnsemblPlants:AT3G18780.3
EMBL:AY064043	EMBL:AY087751	EMBL:AY096381	InterPro:Actin	InterPro:Actin/actin-like_CS	InterPro:Actin_CS
ProteinID:BAB01806.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005198	GO:GO:0005200	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0005856	GO:GO:0007010	GO:GO:0007275	GO:GO:0008150	GO:GO:0009628
GO:GO:0009644	GO:GO:0009653	GO:GO:0009719	GO:GO:0009735	GO:GO:0009987	GO:GO:0010053
GO:GO:0010114	GO:GO:0010218	GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0030154
GO:GO:0040007	GO:GO:0048767	GO:GO:0048768	RefSeq:NP_001327851.1	RefSeq:NP_188508.1	ProteinID:OAP05615.1
PFAM:PF00022	PRINTS:PR00190	ScanProsite:PS00406	ScanProsite:PS00432	ScanProsite:PS01132	PANTHER:PTHR11937
PANTHER:PTHR11937:SF276	UniProt:Q0WL95	UniProt:Q96292	SMART:SM00268	SUPFAM:SSF53067	UniParc:UPI00001253E6
EMBL:Z25952	:	:	:	:	:

Description

ACT2Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q96292]

Coordinates

chr3:+:6475113..6477204

Molecular Weight (calculated)

41879.3 Da

IEP (calculated)

5.289

GRAVY (calculated)

-0.181

Length

377 amino acids

Sequence
(BLAST)

001: MAEADDIQPI VCDNGTGMVK AGFAGDDAPR AVFPSVVGRP RHHGVMVGMN QKDAYVGDEA QSKRGILTLK YPIEHGVVSN WDDMEKIWHH TFYNELRIAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN SPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG FSLPHAILRL DLAGRDLTDY LMKILTERGY
201: MFTTTAEREI VRDIKEKLSF VAVDYEQEME TSKTSSSIEK NYELPDGQVI TIGAERFRCP EVLFQPSFVG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFSG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIS KAEYDEAGPG IVHRKCF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.