Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, nucleus
Predictor Summary:
Predictor Summary:
- cytosol 5
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
18203134
plasma membrane: 19502382 plastid: 21433289 nucleus: 24133045 extracellular: 26072143 plasma membrane: 27800704 plastid: 27992503 |
msms PMID:
26072143
doi
State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China., State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China. Electronic address: gche@whu.edu.cn.
msms PMID:
18203134
doi
Department of Biochemistry and Molecular Biology, Mississippi State University, Mississippi State, MS 39762, USA.
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID:
19502382
doi
Laboratory of Plant Protein Analysis, Plant Education Unit, Nara Institute of Science and Technology, Takayama, Ikoma, Japan.
msms PMID:
27992503
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES08028 | Sorghum | cytosol | 99.2 | 99.2 |
| TraesCS5B01G124100.1 | Wheat | cytosol | 99.2 | 99.2 |
| Zm00001d053177_P004 | Maize | cytosol | 98.94 | 98.94 |
| AT5G09810.1 | Thale cress | cytosol | 98.41 | 98.41 |
| CDY21607 | Canola | cytosol | 98.41 | 98.41 |
| CDX69885 | Canola | cytosol | 98.41 | 98.41 |
| CDY40061 | Canola | cytosol | 92.04 | 98.3 |
| CDY31972 | Canola | cytosol | 92.04 | 98.3 |
| CDY30296 | Canola | cytosol | 92.04 | 98.3 |
| CDX85794 | Canola | cytosol | 92.04 | 98.3 |
| Os05t0106600-01 | Rice | nucleus | 98.14 | 98.14 |
| VIT_12s0178g00200.t01 | Wine grape | cytosol | 98.14 | 98.14 |
| Bra028615.1-P | Field mustard | cytosol | 98.14 | 98.14 |
| Bra009081.1-P | Field mustard | cytosol | 91.78 | 98.02 |
| CDX81140 | Canola | cytosol | 97.88 | 97.88 |
| CDY56544 | Canola | cytosol | 97.88 | 97.88 |
| PGSC0003DMT400047481 | Potato | cytosol | 97.61 | 97.61 |
| Solyc03g078400.2.1 | Tomato | nucleus, plastid | 97.61 | 97.61 |
| KRH64098 | Soybean | cytosol | 97.61 | 97.61 |
| KRH59535 | Soybean | cytosol | 97.61 | 97.61 |
| Bra006033.1-P | Field mustard | cytosol | 97.61 | 97.61 |
| KRH43389 | Soybean | cytosol | 97.61 | 97.61 |
| KRH53856 | Soybean | endoplasmic reticulum, mitochondrion | 85.94 | 97.59 |
| Os03t0836000-01 | Rice | plasma membrane, plastid | 97.35 | 97.35 |
| Os10t0510000-01 | Rice | plastid | 97.35 | 97.35 |
| Solyc11g005330.1.1 | Tomato | nucleus | 97.08 | 97.08 |
| PGSC0003DMT400010174 | Potato | cytosol | 97.08 | 97.08 |
| Os01t0964133-01 | Rice | plasma membrane | 97.08 | 97.08 |
| Os12t0163700-01 | Rice | plastid | 92.84 | 96.42 |
| Solyc01g104770.2.1 | Tomato | nucleus | 96.02 | 96.02 |
| Os03t0718100-01 | Rice | plasma membrane | 96.02 | 96.02 |
| PGSC0003DMT400076499 | Potato | cytosol | 49.07 | 95.85 |
| TraesCS5D01G132200.1 | Wheat | golgi | 93.63 | 95.15 |
| KRH10484 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 94.96 | 94.96 |
| KRH43946 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 94.96 | 94.96 |
| Os05t0438800-01 | Rice | plasma membrane, plastid | 93.37 | 93.62 |
| Solyc04g071260.2.1 | Tomato | plastid | 92.31 | 92.31 |
| AT1G49240.1 | Thale cress | cytosol | 91.51 | 91.51 |
| CDX82326 | Canola | cytosol | 91.51 | 91.51 |
| TraesCS5A01G124300.2 | Wheat | golgi | 99.2 | 91.44 |
| Bra022356.1-P | Field mustard | cytosol | 78.25 | 91.33 |
| CDX99315 | Canola | cytosol | 78.25 | 91.33 |
| AT3G18780.3 | Thale cress | cytosol | 91.25 | 91.25 |
| CDX92272 | Canola | cytosol | 91.25 | 91.25 |
| CDX95498 | Canola | cytosol | 91.25 | 91.25 |
| CDY18545 | Canola | cytosol | 91.25 | 91.25 |
| CDY61982 | Canola | cytosol | 91.25 | 91.25 |
| CDX92271 | Canola | cytosol | 76.13 | 90.54 |
| PGSC0003DMT400076501 | Potato | cytosol | 46.42 | 87.5 |
| Bra037560.1-P | Field mustard | cytoskeleton, cytosol | 78.25 | 83.57 |
| VIT_04s0044g00580.t01 | Wine grape | extracellular | 97.61 | 80.0 |
| PGSC0003DMT400087294 | Potato | mitochondrion | 56.76 | 78.1 |
| HORVU5Hr1G039850.3 | Barley | mitochondrion | 94.96 | 76.99 |
| Os01t0866100-01 | Rice | plasma membrane | 38.2 | 70.94 |
| PGSC0003DMT400022210 | Potato | cytosol | 68.97 | 70.65 |
| PGSC0003DMT400022205 | Potato | cytosol | 67.37 | 69.4 |
| PGSC0003DMT400074882 | Potato | cytosol | 67.64 | 68.92 |
| PGSC0003DMT400074887 | Potato | cytosol | 64.72 | 65.95 |
| PGSC0003DMT400088088 | Potato | cytosol | 32.89 | 63.92 |
| Zm00001d004855_P002 | Maize | cytoskeleton, cytosol, nucleus | 97.61 | 62.37 |
| Os03t0783000-01 | Rice | cytosol, nucleus | 34.48 | 36.11 |
| Os08t0137200-01 | Rice | nucleus | 42.18 | 35.89 |
| Os08t0128300-01 | Rice | cytosol | 16.71 | 35.0 |
| Os02t0596900-01 | Rice | cytosol | 38.46 | 33.88 |
| Os01t0269900-01 | Rice | cytosol | 33.16 | 29.14 |
Protein Annotations
| MapMan:20.2.1 | Gene3D:3.30.420.40 | Gene3D:3.90.640.10 | EntrezGene:4349863 | ProteinID:AAX95098.1 | ProteinID:ABA91666.1 |
| ProteinID:ABA91667.1 | ProteinID:ABA91668.1 | ProteinID:ABG22379.1 | ProteinID:ABG22380.1 | EMBL:AK060893 | EMBL:AY212324 |
| InterPro:Actin | InterPro:Actin/actin-like_CS | InterPro:Actin_CS | ProteinID:BAF27675.1 | ProteinID:BAT12814.1 | ProteinID:EEE51698.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | EnsemblPlantsGene:Os11g0163100 | EnsemblPlants:Os11t0163100-01 |
| PFAM:PF00022 | PRINTS:PR00190 | ScanProsite:PS00406 | ScanProsite:PS00432 | ScanProsite:PS01132 | PANTHER:PTHR11937 |
| PANTHER:PTHR11937:SF252 | UniProt:Q67G20 | SMART:SM00268 | SUPFAM:SSF53067 | UniParc:UPI0000427A3F | RefSeq:XP_015617195.1 |
| RefSeq:XP_015617196.1 | SEG:seg | : | : | : | : |
Description
Similar to Actin 7 (Actin 2). (Os11t0163100-01)
Coordinates
chr11:+:3078917..3081342
Molecular Weight (calculated)
41625.0 Da
IEP (calculated)
5.162
GRAVY (calculated)
-0.167
Length
377 amino acids
Sequence
(BLAST)
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN VPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDS LMKILTERGY
201: SFTTTAEREI VRDIKEKLAY VALDYEQELE AAKSSSSVEK SYELPDGQVI TIGAERFRCP EVLFQPSFIG MEAPGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGSTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIS KGEYDESGPA IVHRKCF
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN VPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDS LMKILTERGY
201: SFTTTAEREI VRDIKEKLAY VALDYEQELE AAKSSSSVEK SYELPDGQVI TIGAERFRCP EVLFQPSFIG MEAPGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGSTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIS KGEYDESGPA IVHRKCF
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN VPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDS LMKILTERGY
201: MFTTTAEREI VRDIKEKLAY VALDYEQELE TAKSSSSVEK NYELPDGQVI TIGAERFRCP EVLFQPSLIG MEAPGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGSTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIS KSEYDESGPS IVHRKCF
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN VPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDS LMKILTERGY
201: MFTTTAEREI VRDIKEKLAY VALDYEQELE TAKSSSSVEK NYELPDGQVI TIGAERFRCP EVLFQPSLIG MEAPGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGSTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIS KSEYDESGPS IVHRKCF
Arabidopsis Description
ACT7AtACT7 [Source:UniProtKB/TrEMBL;Acc:A0A178UEW4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.