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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • nucleus 1
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytoskeleton, cytosol, mitochondrion, nucleus
BaCelLo:cytosol
EpiLoc:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400074882 Potato cytosol 86.76 86.76
PGSC0003DMT400022205 Potato cytosol 85.41 86.34
PGSC0003DMT400022210 Potato cytosol 76.49 76.9
Zm00001d019635_P001 Maize cytosol 26.49 71.01
Zm00001d016605_P001 Maize cytosol 29.19 68.35
PGSC0003DMT400076499 Potato cytosol 35.14 67.36
TraesCS5D01G132200.1 Wheat golgi 66.22 66.04
Zm00001d016508_P001 Maize cytosol 24.32 65.22
Os05t0106600-01 Rice nucleus 65.95 64.72
TraesCS1D01G020000.1 Wheat cytosol 65.95 64.72
TraesCS1B01G024500.1 Wheat golgi, nucleus 65.95 64.72
TraesCS5B01G124100.1 Wheat cytosol 65.95 64.72
PGSC0003DMT400010174 Potato cytosol 65.95 64.72
Os11t0163100-01 Rice nucleus, plasma membrane, plastid 65.95 64.72
GSMUA_Achr6P25350_001 Banana cytosol 65.95 64.72
GSMUA_Achr9P03170_001 Banana cytosol 65.68 64.63
Zm00001d011086_P005 Maize cytosol 65.68 64.46
PGSC0003DMT400047481 Potato cytosol 65.68 64.46
TraesCS5D01G516200.1 Wheat cytosol 65.68 64.46
EES08028 Sorghum cytosol 65.68 64.46
Zm00001d035720_P002 Maize cytosol 65.68 64.46
HORVU5Hr1G117900.1 Barley cytosol 65.68 64.46
KXG21029 Sorghum cytosol 65.68 64.46
KXG23031 Sorghum cytosol 65.68 64.46
TraesCS5B01G516100.1 Wheat cytosol 65.68 64.46
EER90564 Sorghum cytosol 65.41 64.19
GSMUA_Achr2P16160_001 Banana cytosol 65.41 64.19
Zm00001d053177_P004 Maize cytosol 65.41 64.19
GSMUA_Achr3P02960_001 Banana cytosol 65.41 64.19
Os03t0836000-01 Rice plasma membrane, plastid 65.41 64.19
GSMUA_Achr8P16150_001 Banana cytosol 65.41 64.19
GSMUA_Achr9P08850_001 Banana cytosol 60.54 64.18
TraesCS4A01G356100.2 Wheat cytosol 65.68 64.12
GSMUA_Achr5P29190_001 Banana cytosol 60.27 64.08
Os01t0964133-01 Rice plasma membrane 65.14 63.93
PGSC0003DMT400060953 Potato cytosol 65.14 63.93
PGSC0003DMT400049429 Potato cytosol 65.14 63.93
GSMUA_Achr10P... Banana cytosol 64.86 63.66
GSMUA_Achr8P02660_001 Banana cytosol 64.86 63.66
GSMUA_Achr7P10410_001 Banana cytosol 64.86 63.66
GSMUA_Achr11P... Banana cytosol 64.59 63.4
PGSC0003DMT400060225 Potato cytosol 64.59 63.4
PGSC0003DMT400071331 Potato cytosol 64.59 63.4
Zm00001d035722_P007 Maize plasma membrane 65.68 63.12
GSMUA_Achr11P... Banana cytosol 59.46 63.04
PGSC0003DMT400001169 Potato cytosol 64.32 62.96
PGSC0003DMT400077954 Potato cytosol 64.05 62.86
Os05t0438800-01 Rice plasma membrane, plastid 63.78 62.77
PGSC0003DMT400023026 Potato cytosol 63.78 62.6
EES19603 Sorghum cytosol 63.51 62.5
HORVU1Hr1G074350.1 Barley cytosol 63.51 62.5
TraesCS1D01G274400.1 Wheat cytosol 63.51 62.5
TraesCS1A01G274400.1 Wheat golgi 63.51 62.5
TraesCS1B01G283900.1 Wheat cytosol 63.51 62.5
Zm00001d012277_P001 Maize cytosol 63.24 62.23
Zm00001d010159_P002 Maize extracellular, plasma membrane 62.97 61.97
Zm00001d034761_P002 Maize cytosol 65.41 61.73
EES01810 Sorghum cytosol 62.7 61.7
PGSC0003DMT400087294 Potato mitochondrion 45.68 61.68
Zm00001d042731_P002 Maize extracellular, plasma membrane, plastid 62.43 61.44
Zm00001d019396_P001 Maize cytosol 27.3 60.12
TraesCS1A01G020500.2 Wheat cytosol 65.95 59.95
HORVU1Hr1G002840.6 Barley plasma membrane 65.95 59.95
TraesCS5A01G124300.2 Wheat golgi 65.95 59.66
GSMUA_Achr6P34320_001 Banana cytosol 39.19 59.43
KXG21030 Sorghum cytosol 60.81 57.84
GSMUA_Achr10P... Banana cytosol 42.43 57.09
GSMUA_Achr2P08030_001 Banana cytosol 52.97 56.0
Os01t0866100-01 Rice plasma membrane 30.27 55.17
PGSC0003DMT400088088 Potato cytosol 28.65 54.64
Zm00001d004087_P001 Maize cytosol 31.89 54.63
Zm00001d003298_P001 Maize cytosol 38.38 53.99
Zm00001d011087_P001 Maize plastid 65.68 53.52
PGSC0003DMT400076501 Potato cytosol 28.65 53.0
Zm00001d008746_P001 Maize cytosol 38.92 52.36
Zm00001d007792_P001 Maize cytosol 37.03 51.89
HORVU5Hr1G039850.3 Barley mitochondrion 62.97 50.11
Zm00001d004855_P002 Maize cytoskeleton, cytosol, nucleus 65.14 40.85
PGSC0003DMT400052197 Potato cytosol 36.22 33.58
PGSC0003DMT400056033 Potato cytosol 35.95 30.57
PGSC0003DMT400019210 Potato cytosol 28.65 29.44
PGSC0003DMT400027956 Potato cytosol 33.78 29.0
Zm00001d034421_P004 Maize plastid 33.78 26.71
PGSC0003DMT400038724 Potato cytosol 25.41 21.46
Protein Annotations
EnsemblPlants:PGSC0003DMT400074887EnsemblPlantsGene:PGSC0003DMG400029121Gene3D:3.30.420.40Gene3D:3.90.640.10InterPro:ActinPANTHER:PTHR11937
PANTHER:PTHR11937:SF361PFAM:PF00022PGSC:PGSC0003DMG400029121PRINTS:PR00190SMART:SM00268SUPFAM:SSF53067
UniParc:UPI0002965F37UniProt:M1CUB0MapMan:20.2.1:::
Description
Actin [Source:PGSC_GENE;Acc:PGSC0003DMG400029121]
Coordinates
chr4:-:59409774..59411050
Molecular Weight (calculated)
41243.2 Da
IEP (calculated)
6.679
GRAVY (calculated)
0.014
Length
370 amino acids
Sequence
(BLAST)
001: MADGIDIQTV VIDNGTAQSK AGFAGDHAPK TVFESIVGVL RYTGIMLAMK QKDAYFGDEA LHKRGILIVK YHIEHGMVKH WDHMEKIWHH IFYNELRVAP
101: EEHPVLLTEI PLNPKVNREK MTEIMFEKFN VPFMYIAIQA VFSLFGNGCL TGIVLNSGDG STHTVAIYEG HALPHAISCL GIGGHDLTDY LWELIKEVFV
201: CKAAIEEDIT RRMKETITYV ALDIEQEIEK AKNRSSVDKG FELPDGQLFH IGAAGFQCPE VLFQPSLVGK GLTGIHEKVY NSIMKSDVDI RKDLFANIVL
301: SGGSTMFPGL AERMSKEITA LAPRGTKIEV IAPPERKYSI WIGGSILASV NTFKRVSFSL LYLINQSFKS
Best Arabidopsis Sequence Match ( AT3G12110.1 )
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDY LMKILTERGY
201: SFTTSAEREI VRDVKEKLAY IALDYEQEME TANTSSSVEK SYELPDGQVI TIGGERFRCP EVLFQPSLVG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
Arabidopsis Description
ACT11Actin-11 [Source:UniProtKB/Swiss-Prot;Acc:P53496]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.