Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P34320_001 | Banana | cytosol | 74.55 | 84.02 |
| PGSC0003DMT400076501 | Potato | cytosol | 58.91 | 81.0 |
| Zm00001d012277_P001 | Maize | cytosol | 90.91 | 66.49 |
| CDY30296 | Canola | cytosol | 84.73 | 66.01 |
| CDY31972 | Canola | cytosol | 84.73 | 66.01 |
| CDY40061 | Canola | cytosol | 84.73 | 66.01 |
| CDX85794 | Canola | cytosol | 84.73 | 66.01 |
| Bra009081.1-P | Field mustard | cytosol | 84.73 | 66.01 |
| Zm00001d042731_P002 | Maize | extracellular, plasma membrane, plastid | 90.18 | 65.96 |
| EES01810 | Sorghum | cytosol | 89.82 | 65.69 |
| GSMUA_Achr9P03170_001 | Banana | cytosol | 85.82 | 62.77 |
| GSMUA_Achr10P... | Banana | cytosol | 85.45 | 62.33 |
| Zm00001d032480_P002 | Maize | plasma membrane, plastid | 85.45 | 62.33 |
| GSMUA_Achr8P02660_001 | Banana | cytosol | 85.09 | 62.07 |
| GSMUA_Achr2P16160_001 | Banana | cytosol | 85.09 | 62.07 |
| Zm00001d011086_P005 | Maize | cytosol | 85.09 | 62.07 |
| VIT_12s0178g00200.t01 | Wine grape | cytosol | 85.09 | 62.07 |
| Zm00001d053177_P004 | Maize | cytosol | 85.09 | 62.07 |
| Zm00001d013873_P001 | Maize | plasma membrane, plastid | 85.09 | 62.07 |
| Zm00001d035720_P002 | Maize | cytosol | 85.09 | 62.07 |
| AT5G09810.1 | Thale cress | cytosol | 85.09 | 62.07 |
| Zm00001d010159_P002 | Maize | extracellular, plasma membrane | 84.73 | 61.97 |
| GSMUA_Achr7P10410_001 | Banana | cytosol | 84.73 | 61.8 |
| PGSC0003DMT400047481 | Potato | cytosol | 84.73 | 61.8 |
| PGSC0003DMT400010174 | Potato | cytosol | 84.73 | 61.8 |
| KRH59535 | Soybean | cytosol | 84.73 | 61.8 |
| Solyc03g078400.2.1 | Tomato | nucleus, plastid | 84.73 | 61.8 |
| KRH43389 | Soybean | cytosol | 84.73 | 61.8 |
| Solyc11g005330.1.1 | Tomato | nucleus | 84.73 | 61.8 |
| GSMUA_Achr8P16150_001 | Banana | cytosol | 84.73 | 61.8 |
| CDY21607 | Canola | cytosol | 84.73 | 61.8 |
| GSMUA_Achr6P25350_001 | Banana | cytosol | 84.73 | 61.8 |
| CDX69885 | Canola | cytosol | 84.73 | 61.8 |
| CDX81140 | Canola | cytosol | 84.36 | 61.54 |
| Zm00001d013410_P001 | Maize | cytosol | 84.36 | 61.54 |
| CDY56544 | Canola | cytosol | 84.36 | 61.54 |
| KRH64098 | Soybean | cytosol | 84.36 | 61.54 |
| Zm00001d033790_P001 | Maize | cytosol | 84.36 | 61.54 |
| GSMUA_Achr11P... | Banana | cytosol | 84.36 | 61.54 |
| Bra006033.1-P | Field mustard | cytosol | 84.36 | 61.54 |
| GSMUA_Achr3P02960_001 | Banana | cytosol | 84.36 | 61.54 |
| Bra028615.1-P | Field mustard | cytosol | 84.36 | 61.54 |
| Solyc01g104770.2.1 | Tomato | nucleus | 84.0 | 61.27 |
| KRH53856 | Soybean | endoplasmic reticulum, mitochondrion | 73.45 | 60.84 |
| Zm00001d035722_P007 | Maize | plasma membrane | 85.09 | 60.78 |
| GSMUA_Achr5P29190_001 | Banana | cytosol | 76.36 | 60.34 |
| Zm00001d034761_P002 | Maize | cytosol | 85.09 | 59.69 |
| AT3G18780.3 | Thale cress | cytosol | 81.45 | 59.42 |
| CDY18545 | Canola | cytosol | 81.45 | 59.42 |
| AT1G49240.1 | Thale cress | cytosol | 81.45 | 59.42 |
| CDX92272 | Canola | cytosol | 81.45 | 59.42 |
| CDX95498 | Canola | cytosol | 81.45 | 59.42 |
| CDY61982 | Canola | cytosol | 81.45 | 59.42 |
| GSMUA_Achr9P08850_001 | Banana | cytosol | 75.27 | 59.31 |
| GSMUA_Achr11P... | Banana | cytosol | 75.27 | 59.31 |
| KRH43946 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 81.09 | 59.15 |
| Solyc04g071260.2.1 | Tomato | plastid | 81.09 | 59.15 |
| KRH10484 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 81.09 | 59.15 |
| CDX82326 | Canola | cytosol | 81.09 | 59.15 |
| CDX99315 | Canola | cytosol | 64.73 | 55.11 |
| GSMUA_Achr10P... | Banana | cytosol | 54.91 | 54.91 |
| Bra022356.1-P | Field mustard | cytosol | 64.36 | 54.8 |
| CDX92271 | Canola | cytosol | 61.09 | 53.0 |
| Zm00001d011087_P001 | Maize | plastid | 85.09 | 51.54 |
| VIT_04s0044g00580.t01 | Wine grape | extracellular | 84.73 | 50.65 |
| Bra037560.1-P | Field mustard | cytoskeleton, cytosol | 64.0 | 49.86 |
| Zm00001d007792_P001 | Maize | cytosol | 43.27 | 45.08 |
| PGSC0003DMT400087294 | Potato | mitochondrion | 41.45 | 41.61 |
| PGSC0003DMT400022210 | Potato | cytosol | 55.64 | 41.58 |
| PGSC0003DMT400022205 | Potato | cytosol | 53.09 | 39.89 |
| Zm00001d004855_P002 | Maize | cytoskeleton, cytosol, nucleus | 84.36 | 39.32 |
| PGSC0003DMT400074882 | Potato | cytosol | 52.73 | 39.19 |
| PGSC0003DMT400074887 | Potato | cytosol | 52.36 | 38.92 |
| PGSC0003DMT400076499 | Potato | cytosol | 24.0 | 34.2 |
| Zm00001d003298_P001 | Maize | cytosol | 29.82 | 31.18 |
| PGSC0003DMT400088088 | Potato | cytosol | 20.36 | 28.87 |
| Zm00001d022558_P001 | Maize | cytosol | 39.27 | 27.76 |
| Zm00001d027326_P001 | Maize | cytosol, extracellular, nucleus | 42.55 | 26.41 |
| Zm00001d019396_P001 | Maize | cytosol | 15.64 | 25.6 |
| Zm00001d004087_P001 | Maize | cytosol | 18.91 | 24.07 |
| Zm00001d016605_P001 | Maize | cytosol | 13.09 | 22.78 |
| Zm00001d049629_P002 | Maize | nucleus | 29.82 | 22.28 |
| Zm00001d014112_P003 | Maize | cytosol | 33.45 | 22.28 |
| Zm00001d016508_P001 | Maize | cytosol | 10.91 | 21.74 |
| Zm00001d024059_P002 | Maize | cytosol | 33.82 | 21.63 |
| Zm00001d019635_P001 | Maize | cytosol | 10.55 | 21.01 |
| Zm00001d017106_P001 | Maize | cytosol | 31.64 | 20.09 |
| Zm00001d050981_P001 | Maize | cytosol | 31.64 | 18.95 |
| Zm00001d034421_P004 | Maize | plastid | 21.09 | 12.39 |
| Zm00001d008652_P001 | Maize | endoplasmic reticulum, plastid | 6.18 | 7.36 |
Protein Annotations
| EnsemblPlants:Zm00001d008746_P001 | EnsemblPlants:Zm00001d008746_T001 | EnsemblPlantsGene:Zm00001d008746 | EntrezGene:103636793 | Gene3D:3.30.420.40 | Gene3D:3.90.640.10 |
| InterPro:Actin | InterPro:Actin_CS | PANTHER:PTHR11937 | PANTHER:PTHR11937:SF205 | PFAM:PF00022 | ProteinID:AQK90577.1 |
| ScanProsite:PS00432 | SMART:SM00268 | SUPFAM:SSF53067 | UniParc:UPI0004DEBC22 | UniProt:A0A1D6FF59 | MapMan:20.2.1 |
Description
Actin-7
Coordinates
chr8:-:18873330..18874899
Molecular Weight (calculated)
30208.9 Da
IEP (calculated)
4.512
GRAVY (calculated)
-0.155
Length
275 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEDVQPLV CENGTEMVKA GFAGDDTPRA VFPSIYSNNC VVSDRNLSAG IVLDSGDGVS HTVPIYEGYT LPHAILRLAL AGHDLTDNLM KILTERGYSF
101: TTTVEREIVR DIKEKLACVA LDYEQELETA RTSSSVEKSY ELPDGQVITI SAERFRCPEV LFQPSFIGME SDGIHEATDN SIMKCDVDIR KDLYGNVVLS
201: GGSTMFSGIG DRMSKEITAH APSSMKVKVV APPERKYSVW IGGSILASLS TFQQMWISKE EYDESGPGIV HMKCF
101: TTTVEREIVR DIKEKLACVA LDYEQELETA RTSSSVEKSY ELPDGQVITI SAERFRCPEV LFQPSFIGME SDGIHEATDN SIMKCDVDIR KDLYGNVVLS
201: GGSTMFSGIG DRMSKEITAH APSSMKVKVV APPERKYSVW IGGSILASLS TFQQMWISKE EYDESGPGIV HMKCF
001: MADADDIQPI VCDNGTGMVK AGFAGDDAPR AVFPSVVGRP RHHGVMVGMN QKDAYVGDEA QSKRGILTLK YPIEHGVVSN WDDMEKIWHH TFYNELRIAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN SPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG FSLPHAILRL DLAGRDLTDY LMKILTERGY
201: MFTTTAEREI VRDIKEKLSF VAVDYEQEME TSKTSSSIEK NYELPDGQVI TIGAERFRCP EVLFQPSFVG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFSG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIS KAEYDEAGPG IVHRKCF
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN SPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG FSLPHAILRL DLAGRDLTDY LMKILTERGY
201: MFTTTAEREI VRDIKEKLSF VAVDYEQEME TSKTSSSIEK NYELPDGQVI TIGAERFRCP EVLFQPSFVG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFSG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIS KAEYDEAGPG IVHRKCF
Arabidopsis Description
ACT8Actin-8 [Source:UniProtKB/Swiss-Prot;Acc:Q96293]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.