Factsheet for Zm00001d013873_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, plastid
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

extracellular: 20408568
plastid: 22065420
plastid: 23198870
plasma membrane: 23353019
plasma membrane: 23508561
mitochondrion: 27297264

msms PMID: 23353019 doi

D Hopff, S Wienkoop, S Lüthje

University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Plant Physiology, Ohnhorststraße 18, D-22609 Hamburg, Germany.

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93954	Sorghum	cytosol	99.73	99.73
TraesCS1D01G177400.1	Wheat	cytosol	99.73	99.73
HORVU1Hr1G047440.2	Barley	cytosol	99.73	99.73
TraesCS1B01G201400.1	Wheat	cytosol	99.73	99.73
Zm00001d032480_P002	Maize	plasma membrane, plastid	99.47	99.47
Os10t0510000-01	Rice	plastid	98.94	98.94
Zm00001d053177_P004	Maize	cytosol	97.88	97.88
Zm00001d035720_P002	Maize	cytosol	97.35	97.35
Zm00001d011086_P005	Maize	cytosol	97.35	97.35
GSMUA_Achr1P05990_001	Banana	plasma membrane	96.82	96.82
Zm00001d033790_P001	Maize	cytosol	96.02	96.02
Zm00001d013410_P001	Maize	cytosol	96.02	96.02
GSMUA_Achr1P20200_001	Banana	cytosol	88.06	95.68
Zm00001d019635_P001	Maize	cytosol	35.01	95.65
CDX87810	Canola	cytosol	95.49	95.49
Zm00001d035722_P007	Maize	plasma membrane	97.35	95.32
Zm00001d012277_P001	Maize	cytosol	93.9	94.15
Zm00001d042731_P002	Maize	extracellular, plasma membrane, plastid	93.63	93.88
Zm00001d034761_P002	Maize	cytosol	96.55	92.86
Zm00001d010159_P002	Maize	extracellular, plasma membrane	91.78	92.02
Zm00001d016605_P001	Maize	cytosol	38.46	91.77
Zm00001d016508_P001	Maize	cytosol	31.3	85.51
Zm00001d008746_P001	Maize	cytosol	62.07	85.09
Zm00001d019396_P001	Maize	cytosol	36.34	81.55
Zm00001d011087_P001	Maize	plastid	97.35	80.84
Zm00001d007792_P001	Maize	cytosol	55.44	79.17
TraesCS1A01G179000.1	Wheat	cytosol	94.43	79.11
Zm00001d003298_P001	Maize	cytosol	53.32	76.43
Zm00001d004087_P001	Maize	cytosol	41.11	71.76
Zm00001d004855_P002	Maize	cytoskeleton, cytosol, nucleus	96.55	61.69
Zm00001d022558_P001	Maize	cytosol	46.15	44.73
Zm00001d034421_P004	Maize	plastid	45.36	36.54
Zm00001d027326_P001	Maize	cytosol, extracellular, nucleus	41.91	35.67
Zm00001d017106_P001	Maize	cytosol	38.99	33.95
Zm00001d049629_P002	Maize	nucleus	31.57	32.34
Zm00001d050981_P001	Maize	cytosol	38.73	31.81
Zm00001d014112_P003	Maize	cytosol	32.89	30.02
Zm00001d024059_P002	Maize	cytosol	33.95	29.77
Zm00001d008652_P001	Maize	endoplasmic reticulum, plastid	16.71	27.27

Protein Annotations

EntrezGene:100280540	MapMan:20.2.1	Gene3D:3.30.420.40	Gene3D:3.90.640.10	ProteinID:AQK64663.1	InterPro:Actin
InterPro:Actin/actin-like_CS	InterPro:Actin_CS	UniProt:B6SI11	EMBL:EU952376	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	PFAM:PF00022	PRINTS:PR00190	ScanProsite:PS00406	ScanProsite:PS00432
ScanProsite:PS01132	PANTHER:PTHR11937	PANTHER:PTHR11937:SF252	SMART:SM00268	SUPFAM:SSF53067	UniParc:UPI000182B5D7
EnsemblPlantsGene:Zm00001d013873	EnsemblPlants:Zm00001d013873_P001	EnsemblPlants:Zm00001d013873_T001	:	:	:

Description

Actin-2

Coordinates

chr5:+:23536538..23540265

Molecular Weight (calculated)

41682.1 Da

IEP (calculated)

5.166

GRAVY (calculated)

-0.159

Length

377 amino acids

Sequence
(BLAST)

001: MADAEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFS VPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDS LMKILTERGY
201: SFTTTAEREI VRDIKEKLAY VALDYEQELE TAKSSSSVEK SYELPDGQVI TIGAERFRCP EVLFQPSMIG MEAPGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGSTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIS RAEYEESGPA IVHRKCF

Best Arabidopsis Sequence Match ( AT5G09810.1 )
(BLAST)

001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN VPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDS LMKILTERGY
201: MFTTTAEREI VRDIKEKLAY VALDYEQELE TAKSSSSVEK NYELPDGQVI TIGAERFRCP EVLFQPSLIG MEAPGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGSTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIS KSEYDESGPS IVHRKCF

Arabidopsis Description

ACT7AtACT7 [Source:UniProtKB/TrEMBL;Acc:A0A178UEW4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.