Factsheet for TraesCS1B01G201400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G177400.1	Wheat	cytosol	100.0	100.0
HORVU1Hr1G047440.2	Barley	cytosol	100.0	100.0
EER93954	Sorghum	cytosol	99.73	99.73
Zm00001d013873_P001	Maize	plasma membrane, plastid	99.73	99.73
Zm00001d032480_P002	Maize	plasma membrane, plastid	99.47	99.47
Os10t0510000-01	Rice	plastid	98.94	98.94
TraesCS5B01G516100.1	Wheat	cytosol	97.61	97.61
TraesCS5B01G124100.1	Wheat	cytosol	97.61	97.61
TraesCS1B01G024500.1	Wheat	golgi, nucleus	97.08	97.08
GSMUA_Achr1P05990_001	Banana	plasma membrane	96.82	96.82
GSMUA_Achr1P20200_001	Banana	cytosol	88.06	95.68
CDX87810	Canola	cytosol	95.49	95.49
TraesCS1B01G283900.1	Wheat	cytosol	93.63	93.88
TraesCS4B01G050600.1	Wheat	cytosol	90.72	87.24
TraesCS3B01G410000.1	Wheat	cytosol	88.59	82.67
TraesCS1A01G179000.1	Wheat	cytosol	94.69	79.33
TraesCS3B01G401300.2	Wheat	cytosol	44.3	40.14
TraesCS5B01G358500.1	Wheat	cytosol	42.18	35.89
TraesCS6B01G189000.1	Wheat	cytosol	41.64	35.44
TraesCS5B01G422700.1	Wheat	cytosol	32.63	33.98
TraesCS6B01G240500.1	Wheat	cytosol	38.46	33.96
TraesCS7B01G211500.1	Wheat	cytosol	37.67	32.57
TraesCS2B01G597500.1	Wheat	cytosol	32.89	28.84
TraesCS1B01G333100.1	Wheat	cytosol	32.89	28.84

Protein Annotations

EnsemblPlants:TraesCS1B01G201400.1	EnsemblPlantsGene:TraesCS1B01G201400	Gene3D:3.30.420.40	Gene3D:3.90.640.10	InterPro:Actin	InterPro:Actin/actin-like_CS
InterPro:Actin_CS	PANTHER:PTHR11937	PANTHER:PTHR11937:SF252	PFAM:PF00022	PRINTS:PR00190	ScanProsite:PS00406
ScanProsite:PS00432	ScanProsite:PS01132	SMART:SM00268	SUPFAM:SSF53067	TIGR:cd00012	MapMan:20.2.1

Description

No Description!

Coordinates

chr1B:+:360808080..360809536

Molecular Weight (calculated)

41664.1 Da

IEP (calculated)

5.166

GRAVY (calculated)

-0.152

Length

377 amino acids

Sequence
(BLAST)

001: MADAEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFS VPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDS LMKILTERGY
201: SFTTTAEREI VRDIKEKLAY VALDYEQELE TAKSSSSVEK SYELPDGQVI TIGAERFRCP EVLFQPSIIG MEAPGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGSTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIS RAEYEESGPA IVHRKCF

Best Arabidopsis Sequence Match ( AT2G37620.2 )
(BLAST)

001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDIKEKLCY IALDYEQELE TAKTSSSVEK NYELPDGQVI TIGSERFRCP EVLYQPSMIG MENAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF

Arabidopsis Description

ACT1Actin-3 [Source:UniProtKB/Swiss-Prot;Acc:P0CJ47]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.