Factsheet for TraesCS7B01G211500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G196600.1
TraesCS2B01G224200.1
TraesCS2D01G204600.1
TraesCS3A01G134300.3
TraesCS3A01G369400.1
TraesCS3B01G168100.1
TraesCS3B01G401300.2
TraesCS3D01G150600.1
TraesCS3D01G362400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G13180.1	TraesCS3A01G134300.3	AT1G29170.1	17267444
AT1G13180.1	TraesCS3B01G168100.1	AT1G29170.1	17267444
AT1G13180.1	TraesCS3D01G150600.1	AT1G29170.1	17267444
AT1G13180.1	TraesCS2A01G196600.1	AT2G22640.1	17267444
AT1G13180.1	TraesCS2B01G224200.1	AT2G22640.1	17267444
AT1G13180.1	TraesCS2D01G204600.1	AT2G22640.1	17267444
AT1G13180.1	TraesCS3A01G369400.1	AT3G27000.1	17267444
AT1G13180.1	TraesCS3B01G401300.2	AT3G27000.1	17267444
AT1G13180.1	TraesCS3D01G362400.1	AT3G27000.1	17267444

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G311700.1	Wheat	cytosol	98.39	98.39
TraesCS7D01G308200.1	Wheat	cytosol	98.85	95.57
HORVU7Hr1G074460.5	Barley	cytosol	95.18	95.18
KXG24330	Sorghum	cytosol	86.7	86.9
Os08t0128300-01	Rice	cytosol	35.55	86.11
Zm00001d049629_P002	Maize	nucleus	69.72	82.61
VIT_01s0137g00280.t01	Wine grape	cytosol	68.81	70.09
KRH59228	Soybean	nucleus	68.35	69.63
PGSC0003DMT400027956	Potato	cytosol	68.81	69.61
TraesCS6B01G240500.1	Wheat	cytosol	68.12	69.56
Solyc05g013940.2.1	Tomato	cytosol	68.35	69.46
Solyc04g024530.2.1	Tomato	cytosol	67.89	69.0
GSMUA_Achr8P01270_001	Banana	cytosol	67.2	68.62
AT1G13180.1	Thale cress	cytosol	67.2	68.62
CDX98005	Canola	cytosol	66.28	67.68
Bra019815.1-P	Field mustard	cytosol	66.28	67.68
Bra016738.1-P	Field mustard	cytosol	66.06	67.45
CDY19392	Canola	cytosol	65.83	67.21
CDY21087	Canola	cytosol	65.83	67.21
CDY34585	Canola	cytosol	65.6	66.98
KRH59222	Soybean	cytosol	28.67	65.1
TraesCS1B01G024500.1	Wheat	golgi, nucleus	33.49	38.73
TraesCS5B01G516100.1	Wheat	cytosol	33.03	38.2
TraesCS5B01G124100.1	Wheat	cytosol	32.8	37.93
TraesCS1B01G201400.1	Wheat	cytosol	32.57	37.67
TraesCS1B01G283900.1	Wheat	cytosol	31.65	36.7
TraesCS4B01G050600.1	Wheat	cytosol	31.42	34.95
TraesCS3B01G410000.1	Wheat	cytosol	30.5	32.92
TraesCS3B01G401300.2	Wheat	cytosol	27.29	28.61
TraesCS5B01G422700.1	Wheat	cytosol	22.02	26.52
TraesCS5B01G358500.1	Wheat	cytosol	25.92	25.51
TraesCS6B01G189000.1	Wheat	cytosol	25.23	24.83
TraesCS2B01G597500.1	Wheat	cytosol	22.94	23.26
TraesCS1B01G333100.1	Wheat	cytosol	22.71	23.02

Protein Annotations

MapMan:20.2.2.1.2	Gene3D:3.30.420.40	Gene3D:3.90.640.10	InterPro:Actin	InterPro:Arp3	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	GO:GO:0005885	GO:GO:0007015	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043
GO:GO:0034314	PFAM:PF00022	PANTHER:PTHR11937	PANTHER:PTHR11937:SF258	SMART:SM00268	SUPFAM:SSF53067
EnsemblPlantsGene:TraesCS7B01G211500	EnsemblPlants:TraesCS7B01G211500.1	TIGR:cd00012	SEG:seg	:	:

Description

No Description!

Coordinates

chr7B:+:387150106..387159716

Molecular Weight (calculated)

48865.5 Da

IEP (calculated)

4.751

GRAVY (calculated)

-0.260

Length

436 amino acids

Sequence
(BLAST)

001: MDPSERPAVV FDNGTGYSKL GFAGNSEPSF TIPTVVAVNE SFLDQSEQCS SANWLAQYNA GVMADLDFFI GDEALSHFKT SGLYSLRSPI RHGQVNDWDT
101: MERFWQQSIF NYLRCNPEEH YFLLTDSPVS TPESRECMGE IMFETFNVPG LYISVQSVLS LSAGFAYLKT LSEEDSEDSV SDMTGVVVDI GDGAPHIVPV
201: VNGYVIGSSI KSFPLSGSDV TQFVMQLLQE RGELLPPDDA LDIARRVKET YCYTPSDIVK EFKKHDSKPS KYIKQWSAIK PKTGIPYTID IGYERFLGPE
301: IFFHPEMYSA DFSTPLPELI DSCVQSAPID TRRALYKNIV LSGGTTMFKD FHKRLQNNIK KIVDERVAET NAHHHVEVKP VEVNVVTHPI QSYAVWFGGS
401: VAASSHEFFE CCHTKEDYEE HGASICRTST VFKGMY

Best Arabidopsis Sequence Match ( AT1G13180.1 )
(BLAST)

001: MDPTSRPAIV IDNGTGYTKM GFAGNVEPCF ILPTVVAVNE SFLNQSKSSS KATWQTQHNA GVAADLDFYI GDEALAKSRS SSTHNLHYPI EHGQVEDWDA
101: MERYWQQCIF NYLRCDPEDH YFLLTESPLT PPESREYTGE ILFETFNVPG LYIAVNSVLA LAAGYTTSKC EMTGVVVDVG DGATHVVPVA EGYVIGSCIK
201: SIPIAGKDVT LFIQQLMRER GENIPPEDSF DVARKVKEMY CYTCSDIVKE FNKHDKEPAK YIKQWKGVKP KTGAPYTCDV GYERFLGPEV FFNPEIYSND
301: FTTTLPAVID KCIQSAPIDT RRALYKNIVL SGGSTMFKDF GRRLQRDLKK IVDARVLANN ARTGGEITSQ PVEVNVVSHP VQRFAVWFGG SVLSSTPEFF
401: ASCRTKEEYE EYGASICRTN PVFKGMY

Arabidopsis Description

ARP3Actin-related protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAF1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.