Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os01t0208600-01 | |
| Os02t0829900-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G13180.1 | Os01t0208600-01 | AT1G29170.1 | 17267444 |
| AT1G13180.1 | Os02t0829900-01 | AT2G22640.1 | 17267444 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH59222 | Soybean | cytosol | 66.67 | 62.5 |
| KXG24330 | Sorghum | cytosol | 87.22 | 36.09 |
| TraesCS7A01G311700.1 | Wheat | cytosol | 87.22 | 36.01 |
| TraesCS7B01G211500.1 | Wheat | cytosol | 86.11 | 35.55 |
| TraesCS7D01G308200.1 | Wheat | cytosol | 87.22 | 34.81 |
| HORVU7Hr1G074460.5 | Barley | cytosol | 80.56 | 33.26 |
| KRH59228 | Soybean | nucleus | 67.78 | 28.5 |
| Os01t0866100-01 | Rice | plasma membrane | 31.67 | 28.08 |
| VIT_01s0137g00280.t01 | Wine grape | cytosol | 66.67 | 28.04 |
| Solyc04g024530.2.1 | Tomato | cytosol | 66.11 | 27.74 |
| PGSC0003DMT400027956 | Potato | cytosol | 66.11 | 27.61 |
| AT1G13180.1 | Thale cress | cytosol | 65.0 | 27.4 |
| Solyc05g013940.2.1 | Tomato | cytosol | 64.44 | 27.04 |
| CDY34585 | Canola | cytosol | 63.89 | 26.93 |
| CDY19392 | Canola | cytosol | 63.89 | 26.93 |
| CDX98005 | Canola | cytosol | 63.89 | 26.93 |
| Bra019815.1-P | Field mustard | cytosol | 63.89 | 26.93 |
| Bra016738.1-P | Field mustard | cytosol | 63.33 | 26.7 |
| Os02t0596900-01 | Rice | cytosol | 63.33 | 26.64 |
| GSMUA_Achr8P01270_001 | Banana | cytosol | 62.78 | 26.46 |
| CDY21087 | Canola | cytosol | 62.78 | 26.46 |
| Zm00001d049629_P002 | Maize | nucleus | 46.67 | 22.83 |
| Os11t0163100-01 | Rice | nucleus, plasma membrane, plastid | 35.0 | 16.71 |
| Os05t0106600-01 | Rice | nucleus | 35.0 | 16.71 |
| Os01t0964133-01 | Rice | plasma membrane | 35.0 | 16.71 |
| Os10t0510000-01 | Rice | plastid | 34.44 | 16.45 |
| Os03t0836000-01 | Rice | plasma membrane, plastid | 34.44 | 16.45 |
| Os03t0718100-01 | Rice | plasma membrane | 34.44 | 16.45 |
| Os05t0438800-01 | Rice | plasma membrane, plastid | 33.33 | 15.96 |
| Os12t0163700-01 | Rice | plastid | 30.56 | 15.15 |
| Os03t0783000-01 | Rice | cytosol, nucleus | 21.67 | 10.83 |
| Os08t0137200-01 | Rice | nucleus | 24.44 | 9.93 |
| Os01t0269900-01 | Rice | cytosol | 18.33 | 7.69 |
Protein Annotations
| Gene3D:3.30.420.40 | MapMan:35.1 | UniProt:A0A0P0XBI9 | InterPro:Actin | InterPro:Arp3 | ProteinID:BAT03678.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005856 | GO:GO:0005885 | GO:GO:0007015 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0034314 | EnsemblPlantsGene:Os08g0128300 | EnsemblPlants:Os08t0128300-01 | PFAM:PF00022 | PANTHER:PTHR11937 |
| PANTHER:PTHR11937:SF258 | SUPFAM:SSF53067 | UniParc:UPI000393AB38 | : | : | : |
Description
Similar to Actin-like protein 3 (Actin-related protein 3). (Os08t0128300-01)
Coordinates
chr8:-:1609757..1614807
Molecular Weight (calculated)
19962.3 Da
IEP (calculated)
4.019
GRAVY (calculated)
-0.058
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAATRPAVV IDNGTGYSKL GFSGNSEPCF TIPTVVAVNE SFLDQSEMCS SANWIAQYNA GVMADLDFFI GDEALSLFKS SGLYTRKHPI NHGQVDDWDT
101: MERFWQQCIF NYLRCNPEEH YFLLTDSPVS TPESRECAGE IMFETFNVPG LYISVQSVLS LSAGYAFLKS ISDEDSVSVV
101: MERFWQQCIF NYLRCNPEEH YFLLTDSPVS TPESRECAGE IMFETFNVPG LYISVQSVLS LSAGYAFLKS ISDEDSVSVV
001: MDPTSRPAIV IDNGTGYTKM GFAGNVEPCF ILPTVVAVNE SFLNQSKSSS KATWQTQHNA GVAADLDFYI GDEALAKSRS SSTHNLHYPI EHGQVEDWDA
101: MERYWQQCIF NYLRCDPEDH YFLLTESPLT PPESREYTGE ILFETFNVPG LYIAVNSVLA LAAGYTTSKC EMTGVVVDVG DGATHVVPVA EGYVIGSCIK
201: SIPIAGKDVT LFIQQLMRER GENIPPEDSF DVARKVKEMY CYTCSDIVKE FNKHDKEPAK YIKQWKGVKP KTGAPYTCDV GYERFLGPEV FFNPEIYSND
301: FTTTLPAVID KCIQSAPIDT RRALYKNIVL SGGSTMFKDF GRRLQRDLKK IVDARVLANN ARTGGEITSQ PVEVNVVSHP VQRFAVWFGG SVLSSTPEFF
401: ASCRTKEEYE EYGASICRTN PVFKGMY
101: MERYWQQCIF NYLRCDPEDH YFLLTESPLT PPESREYTGE ILFETFNVPG LYIAVNSVLA LAAGYTTSKC EMTGVVVDVG DGATHVVPVA EGYVIGSCIK
201: SIPIAGKDVT LFIQQLMRER GENIPPEDSF DVARKVKEMY CYTCSDIVKE FNKHDKEPAK YIKQWKGVKP KTGAPYTCDV GYERFLGPEV FFNPEIYSND
301: FTTTLPAVID KCIQSAPIDT RRALYKNIVL SGGSTMFKDF GRRLQRDLKK IVDARVLANN ARTGGEITSQ PVEVNVVSHP VQRFAVWFGG SVLSSTPEFF
401: ASCRTKEEYE EYGASICRTN PVFKGMY
Arabidopsis Description
ARP3Actin-related protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAF1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.