Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G13180.1 | KXG31590 | AT1G29170.1 | 17267444 |
| AT1G13180.1 | EES07816 | AT2G22640.1 | 17267444 |
| AT1G13180.1 | EER99952 | AT3G27000.1 | 17267444 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d049629_P002 | Maize | nucleus | 77.47 | 91.58 |
| TraesCS7A01G311700.1 | Wheat | cytosol | 87.59 | 87.39 |
| Os08t0128300-01 | Rice | cytosol | 36.09 | 87.22 |
| TraesCS7B01G211500.1 | Wheat | cytosol | 86.9 | 86.7 |
| HORVU7Hr1G074460.5 | Barley | cytosol | 85.98 | 85.78 |
| TraesCS7D01G308200.1 | Wheat | cytosol | 87.59 | 84.48 |
| Solyc05g013940.2.1 | Tomato | cytosol | 72.18 | 73.19 |
| PGSC0003DMT400027956 | Potato | cytosol | 72.41 | 73.09 |
| VIT_01s0137g00280.t01 | Wine grape | cytosol | 71.49 | 72.66 |
| Solyc04g024530.2.1 | Tomato | cytosol | 71.49 | 72.49 |
| KRH59228 | Soybean | nucleus | 71.26 | 72.43 |
| AT1G13180.1 | Thale cress | cytosol | 70.8 | 72.13 |
| Bra016738.1-P | Field mustard | cytosol | 70.11 | 71.43 |
| Bra019815.1-P | Field mustard | cytosol | 70.11 | 71.43 |
| CDX98005 | Canola | cytosol | 70.11 | 71.43 |
| CDY19392 | Canola | cytosol | 69.89 | 71.19 |
| CDY21087 | Canola | cytosol | 69.89 | 71.19 |
| CDY34585 | Canola | cytosol | 69.66 | 70.96 |
| GSMUA_Achr8P01270_001 | Banana | cytosol | 68.97 | 70.26 |
| KXG30555 | Sorghum | cytosol | 69.89 | 70.21 |
| KRH59222 | Soybean | cytosol | 28.97 | 65.62 |
| KXG21029 | Sorghum | cytosol | 33.1 | 38.2 |
| KXG23031 | Sorghum | cytosol | 32.87 | 37.93 |
| KXG37705 | Sorghum | cytosol | 32.64 | 37.67 |
| EER93954 | Sorghum | cytosol | 32.64 | 37.67 |
| EES08028 | Sorghum | cytosol | 32.64 | 37.67 |
| EES01810 | Sorghum | cytosol | 32.41 | 37.5 |
| EER90564 | Sorghum | cytosol | 32.41 | 37.4 |
| EES19603 | Sorghum | cytosol | 31.72 | 36.7 |
| KXG21030 | Sorghum | cytosol | 29.2 | 32.65 |
| EER99952 | Sorghum | cytosol | 27.82 | 31.11 |
| EER91551 | Sorghum | cytosol | 21.84 | 26.39 |
| EER93001 | Sorghum | cytosol | 26.21 | 25.73 |
| OQU79631 | Sorghum | cytosol | 21.84 | 21.99 |
Protein Annotations
| MapMan:20.2.2.1.2 | Gene3D:3.30.420.40 | Gene3D:3.90.640.10 | UniProt:A0A1B6PF59 | InterPro:Actin | InterPro:Arp3 |
| ncoils:Coil | GO:GO:0000166 | GO:GO:0000902 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005856 |
| GO:GO:0005885 | GO:GO:0007015 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009825 | GO:GO:0009987 |
| GO:GO:0010090 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0030154 | GO:GO:0034314 | GO:GO:0040007 |
| EnsemblPlants:KXG24330 | ProteinID:KXG24330 | ProteinID:KXG24330.1 | PFAM:PF00022 | PANTHER:PTHR11937 | PANTHER:PTHR11937:SF258 |
| SMART:SM00268 | EnsemblPlantsGene:SORBI_3007G026800 | SUPFAM:SSF53067 | UniParc:UPI00081ADA1E | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr7:-:2441352..2448111
Molecular Weight (calculated)
48806.5 Da
IEP (calculated)
4.796
GRAVY (calculated)
-0.240
Length
435 amino acids
Sequence
(BLAST)
(BLAST)
001: MDATARPAIV IDNGTGYSKL GFSGNSEPSF TLPTVVAANE SFLDQTELLS SANWIAQYNA GIMADLDFFI GDEALSRFRS SGLYTLRSPI RHGQVHDWDT
101: MERFWQQCIF NYLRCNPEEH YFLLTDSPVS TPESRECTGE IMFETFNVPG LYISVQSVLS LSAGYAYLKS ISDDDSDTVS DMTGVVVDIG DGAPQIVPVV
201: NGYVIGSSIK SFPFSGSDVT QFVSQLLQER GELLPPEDSL DISRKVKEMY CYTCSDIVKE FKKHDKKPDK YIKHWTAVKP KTGVPYTIDI GYERFLGPEI
301: FFNPEIYSAD FSTPLPELID NCVQSAPIDT RRALYKNIVL SGGSTMFKDF HKRLQNDIKK IVDERVAATN ARHRVEVRPI EVNVVAHPIQ SYAVWFGGSV
401: AASNPEFFEF CHTKEEYEEH GASICRTSPV FKGMY
101: MERFWQQCIF NYLRCNPEEH YFLLTDSPVS TPESRECTGE IMFETFNVPG LYISVQSVLS LSAGYAYLKS ISDDDSDTVS DMTGVVVDIG DGAPQIVPVV
201: NGYVIGSSIK SFPFSGSDVT QFVSQLLQER GELLPPEDSL DISRKVKEMY CYTCSDIVKE FKKHDKKPDK YIKHWTAVKP KTGVPYTIDI GYERFLGPEI
301: FFNPEIYSAD FSTPLPELID NCVQSAPIDT RRALYKNIVL SGGSTMFKDF HKRLQNDIKK IVDERVAATN ARHRVEVRPI EVNVVAHPIQ SYAVWFGGSV
401: AASNPEFFEF CHTKEEYEEH GASICRTSPV FKGMY
001: MDPTSRPAIV IDNGTGYTKM GFAGNVEPCF ILPTVVAVNE SFLNQSKSSS KATWQTQHNA GVAADLDFYI GDEALAKSRS SSTHNLHYPI EHGQVEDWDA
101: MERYWQQCIF NYLRCDPEDH YFLLTESPLT PPESREYTGE ILFETFNVPG LYIAVNSVLA LAAGYTTSKC EMTGVVVDVG DGATHVVPVA EGYVIGSCIK
201: SIPIAGKDVT LFIQQLMRER GENIPPEDSF DVARKVKEMY CYTCSDIVKE FNKHDKEPAK YIKQWKGVKP KTGAPYTCDV GYERFLGPEV FFNPEIYSND
301: FTTTLPAVID KCIQSAPIDT RRALYKNIVL SGGSTMFKDF GRRLQRDLKK IVDARVLANN ARTGGEITSQ PVEVNVVSHP VQRFAVWFGG SVLSSTPEFF
401: ASCRTKEEYE EYGASICRTN PVFKGMY
101: MERYWQQCIF NYLRCDPEDH YFLLTESPLT PPESREYTGE ILFETFNVPG LYIAVNSVLA LAAGYTTSKC EMTGVVVDVG DGATHVVPVA EGYVIGSCIK
201: SIPIAGKDVT LFIQQLMRER GENIPPEDSF DVARKVKEMY CYTCSDIVKE FNKHDKEPAK YIKQWKGVKP KTGAPYTCDV GYERFLGPEV FFNPEIYSND
301: FTTTLPAVID KCIQSAPIDT RRALYKNIVL SGGSTMFKDF GRRLQRDLKK IVDARVLANN ARTGGEITSQ PVEVNVVSHP VQRFAVWFGG SVLSSTPEFF
401: ASCRTKEEYE EYGASICRTN PVFKGMY
Arabidopsis Description
ARP3Actin-related protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAF1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.