Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d027326_P001 | Maize | cytosol, extracellular, nucleus | 97.74 | 97.74 |
| Os08t0137200-01 | Rice | nucleus | 91.87 | 91.87 |
| TraesCS5B01G358500.1 | Wheat | cytosol | 90.29 | 90.29 |
| TraesCS5D01G364800.1 | Wheat | cytosol | 90.07 | 90.07 |
| TraesCS6B01G189000.1 | Wheat | cytosol | 89.84 | 89.84 |
| TraesCS5A01G356000.1 | Wheat | cytosol, nucleus | 89.84 | 89.84 |
| TraesCS6D01G149800.1 | Wheat | cytosol | 89.16 | 89.16 |
| TraesCS6A01G162300.2 | Wheat | cytosol | 88.49 | 88.49 |
| HORVU6Hr1G032610.8 | Barley | cytosol | 89.84 | 82.74 |
| HORVU5Hr1G088030.1 | Barley | plastid | 90.52 | 78.94 |
| PGSC0003DMT400056033 | Potato | cytosol | 74.04 | 75.4 |
| Solyc12g037980.1.1 | Tomato | nucleus | 73.36 | 74.71 |
| KRH66446 | Soybean | nucleus | 73.81 | 73.48 |
| KRH48882 | Soybean | nucleus | 73.14 | 72.65 |
| GSMUA_Achr8P16860_001 | Banana | endoplasmic reticulum | 77.43 | 72.52 |
| KRH41617 | Soybean | nucleus | 69.75 | 71.69 |
| CDX83847 | Canola | cytosol | 69.07 | 69.7 |
| CDY26159 | Canola | cytosol | 69.53 | 69.68 |
| AT1G18450.1 | Thale cress | cytosol | 69.3 | 69.61 |
| CDY19213 | Canola | cytosol | 69.3 | 69.46 |
| CDX96721 | Canola | cytosol | 68.62 | 69.41 |
| VIT_17s0000g04010.t01 | Wine grape | mitochondrion | 57.79 | 57.92 |
| EER90564 | Sorghum | cytosol | 36.34 | 42.71 |
| KXG23031 | Sorghum | cytosol | 36.12 | 42.44 |
| EES08028 | Sorghum | cytosol | 36.12 | 42.44 |
| EER93954 | Sorghum | cytosol | 36.12 | 42.44 |
| EES01810 | Sorghum | cytosol | 35.89 | 42.29 |
| KXG21029 | Sorghum | cytosol | 35.89 | 42.18 |
| KXG37705 | Sorghum | cytosol | 35.44 | 41.64 |
| EES19603 | Sorghum | cytosol | 34.99 | 41.22 |
| KXG21030 | Sorghum | cytosol | 30.7 | 34.96 |
| EER99952 | Sorghum | cytosol | 27.31 | 31.11 |
| KXG30555 | Sorghum | cytosol | 26.86 | 27.48 |
| KXG24330 | Sorghum | cytosol | 25.73 | 26.21 |
| EER91551 | Sorghum | cytosol | 20.99 | 25.83 |
| OQU79631 | Sorghum | cytosol | 23.93 | 24.54 |
Protein Annotations
| MapMan:12.4.6.1 | Gene3D:3.30.420.40 | Gene3D:3.90.640.10 | EntrezGene:8078015 | InterPro:Actin | UniProt:C5WMN2 |
| EnsemblPlants:EER93001 | ProteinID:EER93001 | ProteinID:EER93001.1 | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009628 |
| GO:GO:0009791 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0048235 | GO:GO:0048574 | PFAM:PF00022 |
| PANTHER:PTHR11937 | PANTHER:PTHR11937:SF274 | SMART:SM00268 | EnsemblPlantsGene:SORBI_3001G536000 | SUPFAM:SSF53067 | unigene:Sbi.1959 |
| UniParc:UPI0001A826CD | RefSeq:XP_002466003.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:79936836..79944531
Molecular Weight (calculated)
48711.8 Da
IEP (calculated)
4.917
GRAVY (calculated)
-0.310
Length
443 amino acids
Sequence
(BLAST)
(BLAST)
001: MYGGDEVSAI VIDVGSYSCK AGYAGDDTPK AVFPSVVGSV EQTEGMDDPK PEKEADSASD SKNGAKPMDV DKAKTKRKLY VGQELEFRRD HMEVISPMKD
101: GTVTDWDIVD NIWNHAFRRR LLINPEEHPM LIAEPSTNTA QQREKAAELM FESYKVPALF LAKNAVLTSF ASGRATSLVV DSGGGSTVVS AVHDGFVLQK
201: SVATSPVGGE FLTDCMMKSL ESKGIVIRPR YSFKKKETSP GEYKIVDLDL PNTTESYRLY CMRAIASDVK ESVCRVPDTA FDEVAYANVP TTSYELPDGQ
301: TIEVGADRFK VPDILFNPSL SQTIPGIDGF ADSTPVRGLQ RMVIDSINKC DVDIRKELFS NILLSGGSSS ILQLKERLEK EVLEESPQAA RVKVMASGNS
401: VERRFSVWIG GSILASLGSF QQMWFSKAEY EEHGVSYIQR KCP
101: GTVTDWDIVD NIWNHAFRRR LLINPEEHPM LIAEPSTNTA QQREKAAELM FESYKVPALF LAKNAVLTSF ASGRATSLVV DSGGGSTVVS AVHDGFVLQK
201: SVATSPVGGE FLTDCMMKSL ESKGIVIRPR YSFKKKETSP GEYKIVDLDL PNTTESYRLY CMRAIASDVK ESVCRVPDTA FDEVAYANVP TTSYELPDGQ
301: TIEVGADRFK VPDILFNPSL SQTIPGIDGF ADSTPVRGLQ RMVIDSINKC DVDIRKELFS NILLSGGSSS ILQLKERLEK EVLEESPQAA RVKVMASGNS
401: VERRFSVWIG GSILASLGSF QQMWFSKAEY EEHGVSYIQR KCP
001: MYGGDEVSAI VVDLGSHTCK AGYAGEDAPK AVFPSVIGAV DGVEAMDVDV DSTKTNSNSE DSKTESEKEK SKRKLYVGSQ AMSYRRDHME VLSPIKDGIV
101: SDWDLVDNIW EHAFKSCLMI DPTEHPMLLA EPPLNTQQQR EKAAELMFEK YKVPALFMAK NPVLTSFATG RATSLVVDCG GGSTTISPVH DGYVLQKAVV
201: SSPLGGEFLT DCLLKSLESK GIKIRPRYSF KRKEVRAGEF QVEDVDIPDT TESYKLFCQR MIVGDIKDSI CRVPDTPYDD KSYSNIPTTS YELPDGQTLE
301: IGADRFKVPD VMFNPSIVQT IPGMEKYAEM IPSVRGLPHM VMESINKCDV DIRRELYSSI LLAGGTSSMQ QLKERLEKDL IEESPHSARV KVLASGNTTE
401: RRFSVWIGGS ILASLGSFQQ MWFSKSEYEE HGASYIQRKC P
101: SDWDLVDNIW EHAFKSCLMI DPTEHPMLLA EPPLNTQQQR EKAAELMFEK YKVPALFMAK NPVLTSFATG RATSLVVDCG GGSTTISPVH DGYVLQKAVV
201: SSPLGGEFLT DCLLKSLESK GIKIRPRYSF KRKEVRAGEF QVEDVDIPDT TESYKLFCQR MIVGDIKDSI CRVPDTPYDD KSYSNIPTTS YELPDGQTLE
301: IGADRFKVPD VMFNPSIVQT IPGMEKYAEM IPSVRGLPHM VMESINKCDV DIRRELYSSI LLAGGTSSMQ QLKERLEKDL IEESPHSARV KVLASGNTTE
401: RRFSVWIGGS ILASLGSFQQ MWFSKSEYEE HGASYIQRKC P
Arabidopsis Description
ARP4Actin-related protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q84M92]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.