Skip to main content
crop-pal logo
Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 5
  • mitochondrion 1
  • cytoskeleton 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os03t0836000-01 Rice plasma membrane, plastid 98.41 98.41
HORVU5Hr1G117900.1 Barley cytosol 98.14 98.14
TraesCS5D01G516200.1 Wheat cytosol 98.14 98.14
TraesCS5B01G516100.1 Wheat cytosol 98.14 98.14
TraesCS4A01G356100.2 Wheat cytosol 98.14 97.63
EES08028 Sorghum cytosol 97.61 97.61
AT5G09810.1 Thale cress cytosol 97.08 97.08
GSMUA_Achr9P03170_001 Banana cytosol 96.82 97.07
VIT_12s0178g00200.t01 Wine grape cytosol 96.82 96.82
GSMUA_Achr6P25350_001 Banana cytosol 96.82 96.82
KXG23031 Sorghum cytosol 96.82 96.82
CDY21607 Canola cytosol 96.82 96.82
CDX69885 Canola cytosol 96.82 96.82
CDX85794 Canola cytosol 90.45 96.6
CDY30296 Canola cytosol 90.45 96.6
CDY31972 Canola cytosol 90.45 96.6
CDY40061 Canola cytosol 90.45 96.6
Bra028615.1-P Field mustard cytosol 96.55 96.55
KXG21029 Sorghum cytosol 96.55 96.55
EER93954 Sorghum cytosol 96.55 96.55
Bra009081.1-P Field mustard cytosol 90.19 96.32
GSMUA_Achr7P10410_001 Banana cytosol 96.29 96.29
GSMUA_Achr2P16160_001 Banana cytosol 96.29 96.29
CDY56544 Canola cytosol 96.29 96.29
CDX81140 Canola cytosol 96.29 96.29
GSMUA_Achr9P08850_001 Banana cytosol 89.12 96.28
GSMUA_Achr5P29190_001 Banana cytosol 88.86 96.26
GSMUA_Achr8P16150_001 Banana cytosol 96.02 96.02
GSMUA_Achr8P02660_001 Banana cytosol 96.02 96.02
KRH59535 Soybean cytosol 96.02 96.02
KRH43389 Soybean cytosol 96.02 96.02
Bra006033.1-P Field mustard cytosol 96.02 96.02
GSMUA_Achr3P02960_001 Banana cytosol 96.02 96.02
GSMUA_Achr6P34320_001 Banana cytosol 62.07 95.9
KRH64098 Soybean cytosol 95.76 95.76
Solyc03g078400.2.1 Tomato nucleus, plastid 95.76 95.76
PGSC0003DMT400047481 Potato cytosol 95.76 95.76
GSMUA_Achr10P... Banana cytosol 95.76 95.76
Solyc01g104770.2.1 Tomato nucleus 95.49 95.49
PGSC0003DMT400010174 Potato cytosol 95.49 95.49
KXG37705 Sorghum cytosol 95.49 95.49
Solyc11g005330.1.1 Tomato nucleus 95.49 95.49
KRH53856 Soybean endoplasmic reticulum, mitochondrion 84.08 95.48
Zm00001d034761_P002 Maize cytosol 99.2 95.41
GSMUA_Achr11P... Banana cytosol 87.8 94.84
PGSC0003DMT400076499 Potato cytosol 48.28 94.3
KRH10484 Soybean endoplasmic reticulum, mitochondrion, nucleus 94.16 94.16
GSMUA_Achr11P... Banana cytosol 94.16 94.16
KRH43946 Soybean endoplasmic reticulum, mitochondrion, nucleus 93.9 93.9
EES01810 Sorghum cytosol 93.37 93.62
EES19603 Sorghum cytosol 92.31 92.55
Solyc04g071260.2.1 Tomato plastid 92.04 92.04
AT1G49240.1 Thale cress cytosol 91.25 91.25
CDX82326 Canola cytosol 91.25 91.25
AT3G18780.3 Thale cress cytosol 90.98 90.98
CDY61982 Canola cytosol 90.98 90.98
CDY18545 Canola cytosol 90.98 90.98
CDX92272 Canola cytosol 90.98 90.98
CDX95498 Canola cytosol 90.98 90.98
Bra022356.1-P Field mustard cytosol 77.72 90.71
CDX99315 Canola cytosol 77.72 90.71
CDX92271 Canola cytosol 76.13 90.54
PGSC0003DMT400076501 Potato cytosol 46.42 87.5
GSMUA_Achr10P... Banana cytosol 62.86 86.18
KXG21030 Sorghum cytosol 86.47 83.8
Bra037560.1-P Field mustard cytoskeleton, cytosol 77.72 83.0
VIT_04s0044g00580.t01 Wine grape extracellular 96.29 78.91
PGSC0003DMT400087294 Potato mitochondrion 56.23 77.37
PGSC0003DMT400022210 Potato cytosol 68.44 70.11
PGSC0003DMT400022205 Potato cytosol 67.11 69.13
PGSC0003DMT400074882 Potato cytosol 67.37 68.65
PGSC0003DMT400074887 Potato cytosol 64.19 65.41
PGSC0003DMT400088088 Potato cytosol 32.89 63.92
EER99952 Sorghum cytosol 45.89 44.47
EER93001 Sorghum cytosol 42.71 36.34
EER91551 Sorghum cytosol 33.95 35.56
KXG30555 Sorghum cytosol 37.93 33.03
KXG24330 Sorghum cytosol 37.4 32.41
OQU79631 Sorghum cytosol 34.22 29.86
Protein Annotations
MapMan:20.2.1Gene3D:3.30.420.40Gene3D:3.90.640.10EntrezGene:8080194InterPro:ActinInterPro:Actin/actin-like_CS
InterPro:Actin_CSUniProt:C5WTY3EnsemblPlants:EER90564ProteinID:EER90564ProteinID:EER90564.1GO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0005524PFAM:PF00022PRINTS:PR00190ScanProsite:PS00406
ScanProsite:PS00432ScanProsite:PS01132PANTHER:PTHR11937PANTHER:PTHR11937:SF252SMART:SM00268EnsemblPlantsGene:SORBI_3001G022800
SUPFAM:SSF53067unigene:Sbi.4875UniParc:UPI0001A825C0RefSeq:XP_002463566.1::
Description
hypothetical protein
Coordinates
chr1:+:1835108..1838685
Molecular Weight (calculated)
41706.1 Da
IEP (calculated)
5.061
GRAVY (calculated)
-0.173
Length
377 amino acids
Sequence
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VTHTVPIYEG YALPHAILRL DLAGRDLTDC LMKILTERGY
201: SFTTTAEREI VRDIKEKLAF VALDYEQELE TAKSSSSVEK SYELPDGQVI TIGAERFRCP EVLFQPSLIG MEAPGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIS ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIS KEEYDESGPA IVHRKCF
Best Arabidopsis Sequence Match ( AT2G37620.1 )
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDIKEKLCY IALDYEQELE TAKTSSSVEK NYELPDGQVI TIGSERFRCP EVLYQPSMIG MENAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
Arabidopsis Description
ACT1Actin-3 [Source:UniProtKB/Swiss-Prot;Acc:P0CJ47]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.