CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013141_P001	Maize	cytosol	97.24	97.24
Os03t0780400-01	Rice	plastid	95.86	95.86
Zm00001d034326_P001	Maize	cytosol	84.83	93.18
TraesCS5D01G423800.1	Wheat	golgi	91.72	91.72
TraesCS5A01G416100.1	Wheat	cytosol	91.03	91.03
GSMUA_Achr7P16650_001	Banana	cytosol	53.79	81.25
GSMUA_Achr2P17320_001	Banana	cytosol	80.0	80.0
VIT_05s0049g00980.t01	Wine grape	cytosol	75.86	76.92
KRH51874	Soybean	cytosol	62.07	76.92
GSMUA_Achr7P00900_001	Banana	cytosol	68.97	75.76
GSMUA_Achr2P13120_001	Banana	cytosol	75.17	75.17
VIT_07s0005g03310.t01	Wine grape	cytosol	73.1	74.13
AT2G31200.1	Thale cress	cytosol	74.48	73.97
Solyc09g072590.2.1	Tomato	cytosol	73.1	73.1
KRH34385	Soybean	cytosol	74.48	72.97
KRH67374	Soybean	cytosol	73.1	72.6
KRG92420	Soybean	cytosol	73.79	72.3
KRG95660	Soybean	cytosol	72.41	71.92
Bra018268.1-P	Field mustard	mitochondrion	71.72	71.23
CDY10786	Canola	cytosol	71.72	71.23
CDY24750	Canola	cytosol	70.34	69.86
PGSC0003DMT400044218	Potato	cytosol	69.66	69.66
Solyc09g090110.2.1	Tomato	cytosol	69.66	69.66
HORVU5Hr1G100770.1	Barley	cytosol, plastid	91.72	66.5
EER95084	Sorghum	cytosol	58.62	61.15
Solyc09g072600.1.1	Tomato	cytosol	20.0	59.18
PGSC0003DMT400026656	Potato	mitochondrion	72.41	58.01
EES17589	Sorghum	cytosol	53.79	56.12
EES05762	Sorghum	cytosol	52.41	54.68
Zm00001d034024_P001	Maize	cytosol, plastid	57.24	53.9
EES12628	Sorghum	cytosol	50.34	52.52
KXG37255	Sorghum	cytosol	45.52	47.48
EER97221	Sorghum	cytosol	44.83	46.76
KXG39048	Sorghum	plastid	55.17	42.33
OQU92928	Sorghum	cytosol, plastid	51.03	36.27
KXG37257	Sorghum	cytosol, plastid	42.07	28.91

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	EntrezGene:8084159	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin
UniProt:C5WZ27	EnsemblPlants:EER90794	ProteinID:EER90794	ProteinID:EER90794.3	GO:GO:0003674	GO:GO:0003779
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042	InterPro:IPR002108
InterPro:IPR029006	PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF26	SMART:SM00102
EnsemblPlantsGene:SORBI_3001G070000	SUPFAM:SSF55753	unigene:Sbi.18323	UniParc:UPI0001A8220F	RefSeq:XP_002463796.1	:

Description

hypothetical protein

Coordinates

chr1:+:5311279..5314215

Molecular Weight (calculated)

16818.9 Da

IEP (calculated)

6.522

GRAVY (calculated)

-0.503

Length

145 amino acids

Sequence
(BLAST)

001: MAFMRSHSNA SSGMGVAPNI RETFVELQMK KAYRYVIFKI EEKQKQVVVE KTGATTESYD DFLASLPEND CRYALYDFDF VTGENVQKSK IFFIAWSPST
101: SRIRAKMLYS TSKDRIKHEL DGFHYEIQAT DPTEVDIEVL RERAH

Best Arabidopsis Sequence Match ( AT2G31200.1 )
(BLAST)

001: MSFRGLSRPN AISGMGVADE SKTTFLELQR KKTHRYVVFK IDESKKEVVV EKTGNPTESY DDFLASLPDN DCRYAVYDFD FVTSENCQKS KIFFFAWSPS
101: TSGIRAKVLY STSKDQLSRE LQGIHYEIQA TDPTEVDLEV LRERAN

Arabidopsis Description

ADF6Actin-depolymerizing factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.