Factsheet for GSMUA_Achr2P17320_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P16650_001	Banana	cytosol	62.07	93.75
GSMUA_Achr7P00900_001	Banana	cytosol	82.76	90.91
GSMUA_Achr5P24750_001	Banana	cytosol	68.28	89.19
GSMUA_Achr2P13120_001	Banana	cytosol	88.28	88.28
Os03t0780400-01	Rice	plastid	82.76	82.76
Zm00001d013141_P001	Maize	cytosol	80.69	80.69
EER90794	Sorghum	cytosol	80.0	80.0
TraesCS5D01G423800.1	Wheat	golgi	80.0	80.0
TraesCS5A01G416100.1	Wheat	cytosol	79.31	79.31
Zm00001d034326_P001	Maize	cytosol	71.03	78.03
GSMUA_Achr10P...	Banana	cytosol	61.38	67.42
GSMUA_Achr6P15320_001	Banana	cytosol	61.38	67.42
GSMUA_Achr4P29400_001	Banana	cytosol	43.45	64.29
GSMUA_Achr8P11370_001	Banana	cytosol	48.97	63.96
GSMUA_AchrUn_...	Banana	cytosol	57.24	62.88
GSMUA_Achr11P...	Banana	cytosol	56.55	62.12
GSMUA_Achr11P...	Banana	cytosol	55.17	60.61
GSMUA_Achr1P00290_001	Banana	cytosol	54.48	59.85
GSMUA_Achr1P09160_001	Banana	cytosol	79.31	58.97
HORVU5Hr1G100770.1	Barley	cytosol, plastid	80.0	58.0
GSMUA_AchrUn_...	Banana	extracellular	34.48	57.47
GSMUA_Achr6P33310_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	63.45	55.42
GSMUA_Achr9P04050_001	Banana	endoplasmic reticulum, extracellular	61.38	53.61
GSMUA_Achr5P18890_001	Banana	cytosol, plastid	51.72	52.45
GSMUA_Achr11P...	Banana	cytosol, plastid	51.03	51.75
GSMUA_Achr10P...	Banana	endoplasmic reticulum, vacuole	64.83	50.81
GSMUA_Achr11P...	Banana	cytosol	52.41	44.97
Zm00001d034024_P001	Maize	cytosol, plastid	47.59	44.81
GSMUA_Achr6P15330_001	Banana	cytosol, plastid	27.59	44.44
GSMUA_Achr5P12270_001	Banana	plastid, vacuole	60.69	43.78
GSMUA_Achr10P...	Banana	endoplasmic reticulum	63.45	42.4
GSMUA_Achr2P11510_001	Banana	cytosol	59.31	37.72
GSMUA_Achr2P18590_001	Banana	cytosol	58.62	37.44
GSMUA_Achr2P16220_001	Banana	cytosol	64.83	33.81

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin	GO:GO:0003674
GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042
EnsemblPlantsGene:GSMUA_Achr2G17320_001	EnsemblPlants:GSMUA_Achr2P17320_001	EnsemblPlants:GSMUA_Achr2T17320_001	InterPro:IPR002108	InterPro:IPR029006	UniProt:M0S8S3
PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF20	SMART:SM00102	SUPFAM:SSF55753
UniParc:UPI00029695CF	:	:	:	:	:

Description

Actin-depolymerizing factor 11 [Source:GMGC_GENE;Acc:GSMUA_Achr2G17320_001]

Coordinates

chr2:-:17918270..17923787

Molecular Weight (calculated)

16865.9 Da

IEP (calculated)

5.745

GRAVY (calculated)

-0.546

Length

145 amino acids

Sequence
(BLAST)

001: MAFLRSSSNA SSGMGVAEDC RDIFLELQRK KTHRYVIFKI DEKQKQVIVE KTGGATESYD DFLASLPEND CRYAVYDFDF VTEENCQKSK IFFIAWSPSI
101: SRIRAKMLYA TSKDRFRREM DGVHYEIQAT DPSEVDLEIL RDRAH

Best Arabidopsis Sequence Match ( AT2G31200.1 )
(BLAST)

001: MSFRGLSRPN AISGMGVADE SKTTFLELQR KKTHRYVVFK IDESKKEVVV EKTGNPTESY DDFLASLPDN DCRYAVYDFD FVTSENCQKS KIFFFAWSPS
101: TSGIRAKVLY STSKDQLSRE LQGIHYEIQA TDPTEVDLEV LRERAN

Arabidopsis Description

ADF6Actin-depolymerizing factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.