Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 5
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | cytosol | 54.19 | 93.18 |
| GSMUA_Achr8P11370_001 | Banana | cytosol | 44.93 | 91.89 |
| GSMUA_Achr11P... | Banana | cytosol | 53.3 | 91.67 |
| GSMUA_Achr1P00290_001 | Banana | cytosol | 52.42 | 90.15 |
| VIT_16s0050g00220.t01 | Wine grape | cytosol | 51.54 | 88.64 |
| GSMUA_AchrUn_... | Banana | cytosol | 50.66 | 87.12 |
| EES05762 | Sorghum | cytosol | 51.54 | 84.17 |
| GSMUA_Achr4P29400_001 | Banana | cytosol | 36.12 | 83.67 |
| TraesCS6D01G229200.1 | Wheat | cytosol | 51.1 | 83.45 |
| TraesCS6A01G247000.1 | Wheat | cytosol | 51.1 | 83.45 |
| Os04t0555700-01 | Rice | plasma membrane | 50.66 | 82.73 |
| TraesCS6B01G277600.1 | Wheat | cytosol | 52.42 | 82.07 |
| Zm00001d051388_P001 | Maize | cytosol | 50.22 | 82.01 |
| TraesCS2B01G429500.1 | Wheat | cytosol | 49.34 | 80.58 |
| Zm00001d017516_P001 | Maize | cytosol | 48.9 | 79.86 |
| EES12628 | Sorghum | cytosol | 48.46 | 79.14 |
| GSMUA_Achr6P15320_001 | Banana | cytosol | 45.81 | 78.79 |
| GSMUA_Achr10P... | Banana | cytosol | 44.05 | 75.76 |
| Solyc01g094400.2.1 | Tomato | unclear | 43.61 | 72.26 |
| PGSC0003DMT400000464 | Potato | cytosol | 43.61 | 72.26 |
| PGSC0003DMT400026582 | Potato | mitochondrion | 43.17 | 70.5 |
| Solyc10g017550.2.1 | Tomato | unclear | 42.73 | 69.78 |
| GSMUA_Achr5P12270_001 | Banana | plastid, vacuole | 58.59 | 66.17 |
| GSMUA_Achr9P04050_001 | Banana | endoplasmic reticulum, extracellular | 46.7 | 63.86 |
| GSMUA_Achr6P33310_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 46.26 | 63.25 |
| GSMUA_Achr5P24750_001 | Banana | cytosol | 30.84 | 63.06 |
| GSMUA_Achr7P00900_001 | Banana | cytosol | 35.68 | 61.36 |
| GSMUA_Achr2P13120_001 | Banana | cytosol | 38.33 | 60.0 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, vacuole | 48.9 | 60.0 |
| GSMUA_Achr2P17320_001 | Banana | cytosol | 37.44 | 58.62 |
| GSMUA_Achr7P16650_001 | Banana | cytosol | 24.67 | 58.33 |
| GSMUA_Achr2P11510_001 | Banana | cytosol | 55.95 | 55.7 |
| GSMUA_Achr6P15330_001 | Banana | cytosol, plastid | 22.03 | 55.56 |
| GSMUA_Achr11P... | Banana | cytosol, plastid | 33.92 | 53.85 |
| GSMUA_Achr5P18890_001 | Banana | cytosol, plastid | 33.48 | 53.15 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 50.22 | 52.53 |
| VIT_15s0046g03040.t01 | Wine grape | cytosol | 59.03 | 52.34 |
| GSMUA_Achr11P... | Banana | cytosol | 33.48 | 44.97 |
| GSMUA_Achr1P09160_001 | Banana | cytosol | 37.0 | 43.08 |
| GSMUA_Achr2P16220_001 | Banana | cytosol | 51.98 | 42.45 |
| GSMUA_AchrUn_... | Banana | extracellular | 14.54 | 37.93 |
Protein Annotations
| MapMan:20.2.2.8 | Gene3D:3.40.20.10 | InterPro:ADF-H | InterPro:ADF-H/Gelsolin-like_dom_sf | InterPro:ADF/Cofilin | GO:GO:0003674 |
| GO:GO:0003779 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005856 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015629 | GO:GO:0016043 | GO:GO:0030042 |
| EnsemblPlantsGene:GSMUA_Achr2G18590_001 | EnsemblPlants:GSMUA_Achr2P18590_001 | EnsemblPlants:GSMUA_Achr2T18590_001 | InterPro:IPR002108 | InterPro:IPR029006 | UniProt:M0S950 |
| PFAM:PF00241 | PFscan:PS51263 | PANTHER:PTHR11913 | PANTHER:PTHR11913:SF30 | SMART:SM00102 | SUPFAM:SSF55753 |
| UniParc:UPI000296466E | : | : | : | : | : |
Description
Actin-depolymerizing factor 1 [Source:GMGC_GENE;Acc:GSMUA_Achr2G18590_001]
Coordinates
chr2:-:18954408..18956278
Molecular Weight (calculated)
25816.5 Da
IEP (calculated)
7.940
GRAVY (calculated)
-0.123
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRHGILLRG GDNVKPKKRI PDDSDAIRML MDRRGTVIFL GGLCRAMVLA LTSNLIQICC LVDMFHSCSC LMRNAFGVGI LPICSIRHYA NAVSGMAVHD
101: ECKLKFLDLK AKRNYRFIVF KIDEKIQQVT VEKLGQPDET YDDFTASLPA DECRYAVFDF DFVTDEHCQK SKIFFISWAP DTSRVRSKML YASSKDRFKR
201: ELDGIQVELQ ATDPSEMSID IVKGRAL
101: ECKLKFLDLK AKRNYRFIVF KIDEKIQQVT VEKLGQPDET YDDFTASLPA DECRYAVFDF DFVTDEHCQK SKIFFISWAP DTSRVRSKML YASSKDRFKR
201: ELDGIQVELQ ATDPSEMSID IVKGRAL
001: MANAASGMAV EDECKLKFLE LKSKRNYRFI IFRIDGQQVV VEKLGNPDET YDDFTASLPA NECRYAVFDF DFITDENCQK SKIFFIAWSP DSSRVRMKMV
101: YASSKDRFKR ELDGIQVELQ ATDPSEMSFD IIKSRAL
101: YASSKDRFKR ELDGIQVELQ ATDPSEMSFD IIKSRAL
Arabidopsis Description
ADF7Actin-depolymerizing factor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q67ZM4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.