Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | cytosol | 93.69 | 78.79 |
| GSMUA_Achr1P00290_001 | Banana | cytosol | 91.89 | 77.27 |
| GSMUA_Achr4P29400_001 | Banana | cytosol | 67.57 | 76.53 |
| GSMUA_AchrUn_... | Banana | cytosol | 90.99 | 76.52 |
| VIT_16s0050g00220.t01 | Wine grape | cytosol | 90.09 | 75.76 |
| GSMUA_Achr11P... | Banana | cytosol | 90.09 | 75.76 |
| GSMUA_Achr10P... | Banana | cytosol | 81.98 | 68.94 |
| GSMUA_Achr6P15320_001 | Banana | cytosol | 81.08 | 68.18 |
| Solyc01g094400.2.1 | Tomato | unclear | 77.48 | 62.77 |
| PGSC0003DMT400000464 | Potato | cytosol | 77.48 | 62.77 |
| PGSC0003DMT400026582 | Potato | mitochondrion | 75.68 | 60.43 |
| Solyc10g017550.2.1 | Tomato | unclear | 74.77 | 59.71 |
| GSMUA_Achr7P00900_001 | Banana | cytosol | 66.67 | 56.06 |
| GSMUA_Achr6P15330_001 | Banana | cytosol, plastid | 45.05 | 55.56 |
| GSMUA_Achr9P04050_001 | Banana | endoplasmic reticulum, extracellular | 81.08 | 54.22 |
| GSMUA_Achr5P24750_001 | Banana | cytosol | 54.05 | 54.05 |
| GSMUA_Achr6P33310_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 80.18 | 53.61 |
| GSMUA_Achr2P13120_001 | Banana | cytosol | 65.77 | 50.34 |
| GSMUA_Achr5P12270_001 | Banana | plastid, vacuole | 90.99 | 50.25 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, vacuole | 81.98 | 49.19 |
| GSMUA_Achr2P17320_001 | Banana | cytosol | 63.96 | 48.97 |
| GSMUA_Achr11P... | Banana | cytosol, plastid | 58.56 | 45.45 |
| GSMUA_Achr2P18590_001 | Banana | cytosol | 91.89 | 44.93 |
| GSMUA_Achr5P18890_001 | Banana | cytosol, plastid | 57.66 | 44.76 |
| GSMUA_Achr2P11510_001 | Banana | cytosol | 91.89 | 44.74 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 83.78 | 42.86 |
| GSMUA_Achr7P16650_001 | Banana | cytosol | 36.94 | 42.71 |
| VIT_15s0046g03040.t01 | Wine grape | cytosol | 90.99 | 39.45 |
| GSMUA_Achr11P... | Banana | cytosol | 58.56 | 38.46 |
| GSMUA_AchrUn_... | Banana | extracellular | 28.83 | 36.78 |
| GSMUA_Achr1P09160_001 | Banana | cytosol | 62.16 | 35.38 |
| GSMUA_Achr2P16220_001 | Banana | cytosol | 83.78 | 33.45 |
Protein Annotations
| MapMan:20.2.2.8 | Gene3D:3.40.20.10 | InterPro:ADF-H | InterPro:ADF-H/Gelsolin-like_dom_sf | InterPro:ADF/Cofilin | GO:GO:0003674 |
| GO:GO:0003779 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005856 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015629 | GO:GO:0016043 | GO:GO:0030042 |
| EnsemblPlantsGene:GSMUA_Achr8G11370_001 | EnsemblPlants:GSMUA_Achr8P11370_001 | EnsemblPlants:GSMUA_Achr8T11370_001 | InterPro:IPR002108 | InterPro:IPR029006 | UniProt:M0TPJ0 |
| PFAM:PF00241 | PFscan:PS51263 | PANTHER:PTHR11913 | PANTHER:PTHR11913:SF31 | SMART:SM00102 | SUPFAM:SSF55753 |
| UniParc:UPI000296496E | : | : | : | : | : |
Description
Actin-depolymerizing factor 1 [Source:GMGC_GENE;Acc:GSMUA_Achr8G11370_001]
Coordinates
chr8:-:8203701..8204800
Molecular Weight (calculated)
12838.3 Da
IEP (calculated)
5.248
GRAVY (calculated)
-0.323
Length
111 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVSDECKLK FLELKAKRNF RFISYDDFTA SLPADECRYA VFDFDFVTDE NCQKSKIFFI AWSPDAARVR SKMLYASSKD RFKRELDGIQ VELQATDPSE
101: MSIDIVKGRA L
101: MSIDIVKGRA L
001: MANSASGMHV SDECKLKFLE LKAKRNYRFI VFKIDEKAQQ VMIDKLGNPE ETYEDFTRSI PEDECRYAVY DYDFTTPENC QKSKIFFIAW SPDTSRVRSK
101: MLYASSKDRF KRELDGIQVE LQATDPSEMS LDIIKGRVNL
101: MLYASSKDRF KRELDGIQVE LQATDPSEMS LDIIKGRVNL
Arabidopsis Description
ADF11actin depolymerizing factor 11 [Source:TAIR;Acc:AT1G01750]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.