Factsheet for GSMUA_Achr5P24750_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P16650_001	Banana	cytosol	63.06	72.92
GSMUA_Achr7P00900_001	Banana	cytosol	85.59	71.97
GSMUA_Achr2P17320_001	Banana	cytosol	89.19	68.28
GSMUA_Achr2P13120_001	Banana	cytosol	86.49	66.21
Os12t0628100-01	Rice	extracellular	81.98	62.76
GSMUA_Achr10P...	Banana	cytosol	69.37	58.33
GSMUA_Achr6P15320_001	Banana	cytosol	68.47	57.58
GSMUA_AchrUn_...	Banana	cytosol	64.86	54.55
GSMUA_Achr8P11370_001	Banana	cytosol	54.05	54.05
GSMUA_Achr4P29400_001	Banana	cytosol	46.85	53.06
GSMUA_Achr11P...	Banana	cytosol	63.06	53.03
GSMUA_Achr1P00290_001	Banana	cytosol	62.16	52.27
GSMUA_Achr11P...	Banana	cytosol	62.16	52.27
GSMUA_Achr1P09160_001	Banana	cytosol	82.88	47.18
GSMUA_Achr6P33310_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	70.27	46.99
GSMUA_Achr9P04050_001	Banana	endoplasmic reticulum, extracellular	69.37	46.39
GSMUA_Achr5P18890_001	Banana	cytosol, plastid	55.86	43.36
GSMUA_Achr10P...	Banana	endoplasmic reticulum, vacuole	72.07	43.24
GSMUA_Achr11P...	Banana	cytosol, plastid	54.95	42.66
GSMUA_Achr11P...	Banana	cytosol	56.76	37.28
GSMUA_Achr5P12270_001	Banana	plastid, vacuole	65.77	36.32
GSMUA_Achr10P...	Banana	endoplasmic reticulum	69.37	35.48
GSMUA_Achr6P15330_001	Banana	cytosol, plastid	26.13	32.22
GSMUA_AchrUn_...	Banana	extracellular	25.23	32.18
GSMUA_Achr2P18590_001	Banana	cytosol	63.06	30.84
GSMUA_Achr2P11510_001	Banana	cytosol	63.06	30.7
GSMUA_Achr2P16220_001	Banana	cytosol	71.17	28.42

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin	GO:GO:0003674
GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042
EnsemblPlantsGene:GSMUA_Achr5G24750_001	EnsemblPlants:GSMUA_Achr5P24750_001	EnsemblPlants:GSMUA_Achr5T24750_001	InterPro:IPR002108	InterPro:IPR029006	UniProt:M0T1F0
PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF20	SMART:SM00102	SUPFAM:SSF55753
UniParc:UPI0002956C9E	:	:	:	:	:

Description

Actin-depolymerizing factor 11 [Source:GMGC_GENE;Acc:GSMUA_Achr5G24750_001]

Coordinates

chr5:+:26025710..26027701

Molecular Weight (calculated)

13029.3 Da

IEP (calculated)

5.255

GRAVY (calculated)

-0.521

Length

111 amino acids

Sequence
(BLAST)

001: MGVAEDCKET FLELQRKKTY RYVVFSIDEK QNQVVVEKTG AATESYDDFL ASLPENDCRY AIYDFDFVTE ENCQKSKIFF VAWSPSISRI RAKMLYATSK
101: DRFRRELDGV H

Best Arabidopsis Sequence Match ( AT2G31200.1 )
(BLAST)

001: MSFRGLSRPN AISGMGVADE SKTTFLELQR KKTHRYVVFK IDESKKEVVV EKTGNPTESY DDFLASLPDN DCRYAVYDFD FVTSENCQKS KIFFFAWSPS
101: TSGIRAKVLY STSKDQLSRE LQGIHYEIQA TDPTEVDLEV LRERAN

Arabidopsis Description

ADF6Actin-depolymerizing factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.