Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol | 88.64 | 88.64 |
| Os05t0113400-01 | Rice | cytosol, extracellular, plastid | 85.61 | 81.88 |
| GSMUA_Achr8P11370_001 | Banana | cytosol | 68.18 | 81.08 |
| KRH19714 | Soybean | nucleus | 84.85 | 80.58 |
| GSMUA_AchrUn_... | Banana | cytosol | 78.79 | 78.79 |
| GSMUA_Achr11P... | Banana | cytosol | 78.79 | 78.79 |
| PGSC0003DMT400087280 | Potato | cytosol | 81.06 | 78.68 |
| VIT_13s0019g00550.t01 | Wine grape | cytosol | 82.58 | 78.42 |
| CDY31586 | Canola | cytosol | 78.03 | 78.03 |
| Bra006686.1-P | Field mustard | cytosol | 78.03 | 78.03 |
| CDX71067 | Canola | cytosol | 78.03 | 78.03 |
| Solyc09g010440.2.1 | Tomato | plastid | 81.82 | 77.7 |
| GSMUA_Achr11P... | Banana | cytosol | 77.27 | 77.27 |
| PGSC0003DMT400023061 | Potato | cytosol | 80.3 | 76.26 |
| EES17589 | Sorghum | cytosol | 80.3 | 76.26 |
| HORVU0Hr1G000200.1 | Barley | cytosol | 80.3 | 76.26 |
| Solyc04g011370.2.1 | Tomato | extracellular | 82.58 | 76.22 |
| GSMUA_Achr1P00290_001 | Banana | cytosol | 75.76 | 75.76 |
| AT5G59890.1 | Thale cress | cytosol | 79.55 | 75.54 |
| PGSC0003DMT400071339 | Potato | cytosol | 81.82 | 75.52 |
| KRH11708 | Soybean | mitochondrion | 78.79 | 74.82 |
| Solyc10g084660.1.1 | Tomato | cytosol, extracellular | 78.79 | 74.82 |
| KRH32309 | Soybean | cytosol, nucleus | 81.06 | 74.31 |
| KRH36708 | Soybean | mitochondrion | 78.03 | 74.1 |
| GSMUA_Achr4P29400_001 | Banana | cytosol | 54.55 | 73.47 |
| Zm00001d035629_P001 | Maize | cytosol | 77.27 | 73.38 |
| PGSC0003DMT400028567 | Potato | cytosol | 77.27 | 73.38 |
| Bra002522.1-P | Field mustard | cytosol | 77.27 | 73.38 |
| Zm00001d035625_P001 | Maize | cytosol | 71.97 | 72.52 |
| Bra020277.1-P | Field mustard | cytosol | 80.3 | 71.14 |
| PGSC0003DMT400008913 | Potato | cytosol | 73.48 | 70.8 |
| Solyc06g005360.2.1 | Tomato | cytosol, extracellular, nucleus | 73.48 | 70.8 |
| AT5G59880.1 | Thale cress | cytosol | 74.24 | 70.5 |
| Bra006687.1-P | Field mustard | cytosol | 80.3 | 69.28 |
| GSMUA_Achr9P04050_001 | Banana | endoplasmic reticulum, extracellular | 87.12 | 69.28 |
| GSMUA_Achr7P00900_001 | Banana | cytosol | 68.94 | 68.94 |
| CDX88730 | Canola | cytosol | 80.3 | 68.83 |
| GSMUA_Achr6P33310_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 86.36 | 68.67 |
| AT3G46010.2 | Thale cress | cytosol | 78.03 | 68.67 |
| GSMUA_Achr5P24750_001 | Banana | cytosol | 57.58 | 68.47 |
| CDY09242 | Canola | cytosol | 78.79 | 67.97 |
| Bra020276.1-P | Field mustard | cytosol | 78.03 | 67.32 |
| VIT_06s0004g04280.t01 | Wine grape | cytosol | 84.85 | 66.67 |
| GSMUA_Achr6P15330_001 | Banana | cytosol, plastid | 44.7 | 65.56 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, vacuole | 91.67 | 65.41 |
| AT3G46000.2 | Thale cress | cytosol | 76.52 | 64.74 |
| CDX71068 | Canola | cytosol | 80.3 | 64.63 |
| Bra038266.1-P | Field mustard | cytosol | 80.3 | 63.47 |
| CDX99133 | Canola | cytosol, plastid | 80.3 | 63.47 |
| CDX86048 | Canola | cytosol, plastid | 79.55 | 62.87 |
| GSMUA_Achr2P13120_001 | Banana | cytosol | 68.18 | 62.07 |
| GSMUA_Achr2P17320_001 | Banana | cytosol | 67.42 | 61.38 |
| GSMUA_Achr7P16650_001 | Banana | cytosol | 42.42 | 58.33 |
| VIT_08s0040g03360.t01 | Wine grape | plastid | 83.33 | 58.2 |
| AT3G45990.1 | Thale cress | cytosol | 57.58 | 57.14 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 93.94 | 57.14 |
| VIT_10s0092g00330.t01 | Wine grape | cytosol | 38.64 | 56.04 |
| VIT_11s0103g00260.t01 | Wine grape | cytosol | 50.0 | 55.93 |
| CDX88731 | Canola | cytosol, plastid | 78.03 | 51.76 |
| GSMUA_Achr5P12270_001 | Banana | plastid, vacuole | 78.79 | 51.74 |
| GSMUA_Achr11P... | Banana | cytosol, plastid | 54.55 | 50.35 |
| GSMUA_Achr5P18890_001 | Banana | cytosol, plastid | 53.03 | 48.95 |
| GSMUA_Achr2P18590_001 | Banana | cytosol | 78.79 | 45.81 |
| GSMUA_Achr1P09160_001 | Banana | cytosol | 66.67 | 45.13 |
| GSMUA_Achr2P11510_001 | Banana | cytosol | 75.76 | 43.86 |
| GSMUA_Achr2P16220_001 | Banana | cytosol | 90.15 | 42.81 |
| GSMUA_Achr11P... | Banana | cytosol | 53.79 | 42.01 |
| CDX80216 | Canola | cytosol | 78.03 | 40.87 |
| GSMUA_AchrUn_... | Banana | extracellular | 25.76 | 39.08 |
Protein Annotations
| MapMan:20.2.2.8 | Gene3D:3.40.20.10 | InterPro:ADF-H | InterPro:ADF-H/Gelsolin-like_dom_sf | InterPro:ADF/Cofilin | GO:GO:0003674 |
| GO:GO:0003779 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005856 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015629 | GO:GO:0016043 | GO:GO:0030042 |
| EnsemblPlantsGene:GSMUA_Achr6G15320_001 | EnsemblPlants:GSMUA_Achr6P15320_001 | EnsemblPlants:GSMUA_Achr6T15320_001 | InterPro:IPR002108 | InterPro:IPR029006 | UniProt:M0T780 |
| PFAM:PF00241 | PFscan:PS51263 | PANTHER:PTHR11913 | PANTHER:PTHR11913:SF30 | SMART:SM00102 | SUPFAM:SSF55753 |
| UniParc:UPI000295BE05 | : | : | : | : | : |
Description
Actin-depolymerizing factor 1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G15320_001]
Coordinates
chr6:-:10211763..10213253
Molecular Weight (calculated)
15430.5 Da
IEP (calculated)
6.628
GRAVY (calculated)
-0.532
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVNDDCKLK FLELKAKRTY RFIIFKIDEK QKQVIVEKLG EPNLTYDDFT ATLPTNECRY AIYDFDFVNE ENCQKSKIIF IAWSPDTSRV RSKMLYASSK
101: DRFKRELDGI QVELQATDPS EMGLDVIRGR AN
101: DRFKRELDGI QVELQATDPS EMGLDVIRGR AN
001: MAVHDDCKLR FLELKAKRTH RFIVYKIEEK QKQVIVEKVG EPILTYEDFA ASLPADECRY AIYDFDFVTA ENCQKSKIFF IAWCPDVAKV RSKMIYASSK
101: DRFKRELDGI QVELQATDPT EMDLDVLKSR VN
101: DRFKRELDGI QVELQATDPT EMDLDVLKSR VN
Arabidopsis Description
ADF4Actin-depolymerizing factor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.