Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006686.1-P | Field mustard | cytosol | 91.37 | 96.21 |
| CDX71067 | Canola | cytosol | 90.65 | 95.45 |
| CDY09242 | Canola | cytosol | 97.12 | 88.24 |
| Bra020276.1-P | Field mustard | cytosol | 96.4 | 87.58 |
| KRH19714 | Soybean | nucleus | 86.33 | 86.33 |
| AT3G46010.2 | Thale cress | cytosol | 92.81 | 86.0 |
| GSMUA_Achr10P... | Banana | cytosol | 80.58 | 84.85 |
| KRH11708 | Soybean | mitochondrion | 83.45 | 83.45 |
| KRH36708 | Soybean | mitochondrion | 82.73 | 82.73 |
| AT5G59880.1 | Thale cress | cytosol | 82.73 | 82.73 |
| Os05t0113400-01 | Rice | cytosol, extracellular, plastid | 80.58 | 81.16 |
| PGSC0003DMT400008913 | Potato | cytosol | 79.86 | 81.02 |
| Solyc06g005360.2.1 | Tomato | cytosol, extracellular, nucleus | 79.86 | 81.02 |
| EER95084 | Sorghum | cytosol | 80.58 | 80.58 |
| EES17589 | Sorghum | cytosol | 80.58 | 80.58 |
| HORVU0Hr1G000200.1 | Barley | cytosol | 79.86 | 79.86 |
| GSMUA_Achr6P15320_001 | Banana | cytosol | 75.54 | 79.55 |
| KRH32309 | Soybean | cytosol, nucleus | 82.01 | 79.17 |
| Zm00001d035625_P001 | Maize | cytosol | 74.1 | 78.63 |
| Zm00001d035629_P001 | Maize | cytosol | 77.7 | 77.7 |
| AT3G46000.2 | Thale cress | cytosol | 84.89 | 75.64 |
| AT4G25590.1 | Thale cress | cytosol | 71.94 | 72.99 |
| AT5G52360.1 | Thale cress | cytosol | 71.22 | 72.26 |
| AT1G01750.2 | Thale cress | cytosol | 73.38 | 70.34 |
| GSMUA_Achr6P33310_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 82.73 | 69.28 |
| GSMUA_Achr9P04050_001 | Banana | endoplasmic reticulum, extracellular | 82.73 | 69.28 |
| CDX88731 | Canola | cytosol, plastid | 96.4 | 67.34 |
| AT4G00680.2 | Thale cress | cytosol, extracellular | 71.22 | 66.0 |
| AT3G45990.1 | Thale cress | cytosol | 61.15 | 63.91 |
| VIT_08s0040g03360.t01 | Wine grape | plastid | 86.33 | 63.49 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, vacuole | 84.17 | 63.24 |
| VIT_11s0103g00260.t01 | Wine grape | cytosol | 51.8 | 61.02 |
| VIT_10s0092g00330.t01 | Wine grape | cytosol | 39.57 | 60.44 |
| AT2G31200.1 | Thale cress | cytosol | 59.71 | 56.85 |
| AT2G16700.1 | Thale cress | cytosol | 55.4 | 53.85 |
| AT4G34970.1 | Thale cress | cytosol | 53.96 | 53.19 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 82.73 | 53.0 |
| GSMUA_Achr2P16220_001 | Banana | cytosol | 81.3 | 40.65 |
Protein Annotations
| PDB:1F7S | MapMan:20.2.2.8 | Gene3D:3.40.20.10 | EntrezGene:823744 | EntrezGene:836111 | UniProt:A0A178UJT7 |
| ProteinID:AAC72407.1 | InterPro:ADF-H | InterPro:ADF-H/Gelsolin-like_dom_sf | InterPro:ADF/Cofilin | Symbol:ADF4 | ProteinID:AED97247.1 |
| ProteinID:AED97248.1 | ProteinID:AEE78100.1 | EMBL:AF102822 | EMBL:AK317148 | ProteinID:ANM70922.1 | ArrayExpress:AT5G59890 |
| EnsemblPlantsGene:AT5G59890 | RefSeq:AT5G59890 | TAIR:AT5G59890 | RefSeq:AT5G59890-TAIR-G | EnsemblPlants:AT5G59890.1 | TAIR:AT5G59890.1 |
| EMBL:AY035154 | EMBL:AY050460 | EMBL:AY062940 | EMBL:AY084757 | EMBL:AY085853 | EMBL:AY090336 |
| Unigene:At.7673 | ProteinID:BAB08357.1 | ProteinID:CAB88325.1 | GO:GO:0003674 | GO:GO:0003779 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005856 |
| GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009605 |
| GO:GO:0009607 | GO:GO:0009870 | GO:GO:0009987 | GO:GO:0015629 | GO:GO:0016043 | GO:GO:0030042 |
| GO:GO:0042742 | InterPro:IPR002108 | InterPro:IPR029006 | RefSeq:NP_001318843.1 | RefSeq:NP_190187.1 | RefSeq:NP_568916.2 |
| RefSeq:NP_851228.1 | ProteinID:OAO94009.1 | ProteinID:OAP04078.1 | PFAM:PF00241 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51263 | PANTHER:PTHR11913 |
| PANTHER:PTHR11913:SF50 | UniProt:Q9ZSK3 | SMART:SM00102 | SUPFAM:SSF55753 | EMBL:U48938 | UniParc:UPI00000013E4 |
Description
ADF4Actin-depolymerizing factor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK3]
Coordinates
chr5:+:24122348..24123912
Molecular Weight (calculated)
16035.3 Da
IEP (calculated)
6.518
GRAVY (calculated)
-0.313
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: MANAASGMAV HDDCKLRFLE LKAKRTHRFI VYKIEEKQKQ VIVEKVGEPI LTYEDFAASL PADECRYAIY DFDFVTAENC QKSKIFFIAW CPDVAKVRSK
101: MIYASSKDRF KRELDGIQVE LQATDPTEMD LDVLKSRVN
101: MIYASSKDRF KRELDGIQVE LQATDPTEMD LDVLKSRVN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.