Factsheet for Bra006686.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX71067	Canola	cytosol	99.24	99.24
AT5G59890.1	Thale cress	cytosol	96.21	91.37
Bra020276.1-P	Field mustard	cytosol	97.73	84.31
GSMUA_Achr10P...	Banana	cytosol	83.33	83.33
Bra002522.1-P	Field mustard	cytosol	85.61	81.3
KRH19714	Soybean	nucleus	84.85	80.58
GSMUA_Achr6P15320_001	Banana	cytosol	78.03	78.03
Bra020277.1-P	Field mustard	cytosol	87.88	77.85
KRH11708	Soybean	mitochondrion	81.82	77.7
Os05t0113400-01	Rice	cytosol, extracellular, plastid	81.06	77.54
KRH36708	Soybean	mitochondrion	81.06	76.98
EES17589	Sorghum	cytosol	80.3	76.26
Solyc06g005360.2.1	Tomato	cytosol, extracellular, nucleus	78.79	75.91
PGSC0003DMT400008913	Potato	cytosol	78.79	75.91
Bra006687.1-P	Field mustard	cytosol	87.88	75.82
HORVU0Hr1G000200.1	Barley	cytosol	79.55	75.54
EER95084	Sorghum	cytosol	78.79	74.82
KRH32309	Soybean	cytosol, nucleus	81.06	74.31
Zm00001d035625_P001	Maize	cytosol	73.48	74.05
Zm00001d035629_P001	Maize	cytosol	77.27	73.38
Bra029119.1-P	Field mustard	cytosol	71.21	72.31
Bra028304.1-P	Field mustard	cytosol	69.7	70.77
Bra019151.1-P	Field mustard	cytosol	68.94	70.54
Bra010456.1-P	Field mustard	cytosol	71.97	68.35
Bra038266.1-P	Field mustard	cytosol	85.61	67.66
Bra033236.1-P	Field mustard	cytosol	71.21	67.14
CDX88731	Canola	cytosol, plastid	100.0	66.33
GSMUA_Achr6P33310_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	83.33	66.27
GSMUA_Achr9P04050_001	Banana	endoplasmic reticulum, extracellular	82.58	65.66
VIT_10s0092g00330.t01	Wine grape	cytosol	42.42	61.54
Bra013901.1-P	Field mustard	cytosol	70.45	61.18
VIT_08s0040g03360.t01	Wine grape	plastid	86.36	60.32
GSMUA_Achr10P...	Banana	endoplasmic reticulum, vacuole	82.58	58.92
VIT_11s0103g00260.t01	Wine grape	cytosol	51.52	57.63
Bra018268.1-P	Field mustard	mitochondrion	62.88	56.85
Bra017683.1-P	Field mustard	cytosol	52.27	51.11
Bra011575.1-P	Field mustard	cytosol	53.79	50.0
GSMUA_Achr10P...	Banana	endoplasmic reticulum	81.06	49.31
Bra013058.1-P	Field mustard	cytosol	53.03	48.95
GSMUA_Achr2P16220_001	Banana	cytosol	81.06	38.49
Bra037352.1-P	Field mustard	cytosol	66.67	31.32

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin	EnsemblPlantsGene:Bra006686
EnsemblPlants:Bra006686.1	EnsemblPlants:Bra006686.1-P	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0006950	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009605	GO:GO:0009607	GO:GO:0009870	GO:GO:0009987
GO:GO:0015629	GO:GO:0016043	GO:GO:0030042	GO:GO:0042742	InterPro:IPR002108	InterPro:IPR029006
UniProt:M4CR45	PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF50	SMART:SM00102
SUPFAM:SSF55753	UniParc:UPI0002540218	SEG:seg	:	:	:

Description

AT5G59890 (E=3e-060) ADF4, ATADF4 | ADF4 (ACTIN DEPOLYMERIZING FACTOR 4); actin binding

Coordinates

chrA03:-:4628376..4629603

Molecular Weight (calculated)

15482.6 Da

IEP (calculated)

6.519

GRAVY (calculated)

-0.379

Length

132 amino acids

Sequence
(BLAST)

001: MAVHDDCKLR FLELKAKRTH RFIVYKIEEK QKQVVVEKVG EPILSYEDFA ASLPAEECRY AIYDFDFVTT ENCQKSKIFF IAWCPDVAKV RSKMIYASSK
101: DRFKRELDGI QVELQATDPT EMDLDVFKSR VN

Best Arabidopsis Sequence Match ( AT5G59890.1 )
(BLAST)

001: MANAASGMAV HDDCKLRFLE LKAKRTHRFI VYKIEEKQKQ VIVEKVGEPI LTYEDFAASL PADECRYAIY DFDFVTAENC QKSKIFFIAW CPDVAKVRSK
101: MIYASSKDRF KRELDGIQVE LQATDPTEMD LDVLKSRVN

Arabidopsis Description

ADF4Actin-depolymerizing factor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.