Factsheet for Bra018268.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra034778.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G31200.1	Bra034778.1-P	AT3G12110.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY10786	Canola	cytosol	99.32	99.32
CDY24750	Canola	cytosol	96.58	96.58
AT2G31200.1	Thale cress	cytosol	84.93	84.93
VIT_07s0005g03310.t01	Wine grape	cytosol	80.14	81.82
KRH67374	Soybean	cytosol	79.45	79.45
KRG95660	Soybean	cytosol	77.4	77.4
Os03t0780400-01	Rice	plastid	71.92	72.41
Os12t0628100-01	Rice	extracellular	71.23	71.72
EER90794	Sorghum	cytosol	71.23	71.72
Zm00001d034326_P001	Maize	cytosol	64.38	71.21
Zm00001d013141_P001	Maize	cytosol	70.55	71.03
TraesCS5D01G423800.1	Wheat	golgi	70.55	71.03
TraesCS5A01G416100.1	Wheat	cytosol	69.86	70.34
Solyc09g072600.1.1	Tomato	cytosol	22.6	67.35
Bra002522.1-P	Field mustard	cytosol	61.64	64.75
Bra006686.1-P	Field mustard	cytosol	56.85	62.88
Bra010456.1-P	Field mustard	cytosol	58.9	61.87
Bra029119.1-P	Field mustard	cytosol	54.79	61.54
Bra028304.1-P	Field mustard	cytosol	54.79	61.54
Bra020277.1-P	Field mustard	cytosol	62.33	61.07
PGSC0003DMT400026656	Potato	mitochondrion	75.34	60.77
Bra019151.1-P	Field mustard	cytosol	53.42	60.47
Bra033236.1-P	Field mustard	cytosol	56.85	59.29
Bra006687.1-P	Field mustard	cytosol	61.64	58.82
TraesCS1B01G197600.1	Wheat	cytosol	59.59	58.0
TraesCS1D01G186600.1	Wheat	cytosol	59.59	57.62
Bra013058.1-P	Field mustard	cytosol	56.16	57.34
Os10t0521100-01	Rice	cytosol	58.9	56.95
Bra020276.1-P	Field mustard	cytosol	59.59	56.86
GSMUA_Achr1P09160_001	Banana	cytosol	75.34	56.41
Bra017683.1-P	Field mustard	cytosol	51.37	55.56
TraesCS1A01G183100.2	Wheat	cytosol	58.9	55.48
Bra013901.1-P	Field mustard	cytosol	57.53	55.26
HORVU1Hr1G048450.4	Barley	cytosol	59.59	55.06
Bra011575.1-P	Field mustard	cytosol	52.05	53.52
Bra038266.1-P	Field mustard	cytosol	59.59	52.1
HORVU5Hr1G100770.1	Barley	cytosol, plastid	70.55	51.5
KXG39048	Sorghum	plastid	58.9	45.5
Zm00001d034024_P001	Maize	cytosol, plastid	42.47	40.26
Zm00001d029656_P003	Maize	cytosol	56.16	39.05
Bra037352.1-P	Field mustard	cytosol	56.16	29.18
Os07t0297500-00	Rice	cytosol	42.47	26.72

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin	EnsemblPlantsGene:Bra018268
EnsemblPlants:Bra018268.1	EnsemblPlants:Bra018268.1-P	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0008150	GO:GO:0009987
GO:GO:0015629	GO:GO:0016043	GO:GO:0030042	InterPro:IPR002108	InterPro:IPR029006	UniProt:M4DP28
PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF20	SMART:SM00102	SUPFAM:SSF55753
UniParc:UPI00025479CF	:	:	:	:	:

Description

AT2G31200 (E=6e-069) ADF6, ATADF6 | ADF6 (ACTIN DEPOLYMERIZING FACTOR 6); actin binding

Coordinates

chrA05:+:7024491..7025174

Molecular Weight (calculated)

16938.0 Da

IEP (calculated)

8.651

GRAVY (calculated)

-0.675

Length

146 amino acids

Sequence
(BLAST)

001: MSFRGLRKPN ATSGMGVADQ SKTTYHELQR KKTHRYVVFK IDELKNQVVV EKTGNPAESY DDFLASLPAN DCRYAVYDFD FVTAENCQKS KIFFVAWSPE
101: TSRIRAKMLY ATSKERFRRE LQGIHYEIQA TDPTEVDLDV LRERAN

Best Arabidopsis Sequence Match ( AT2G31200.1 )
(BLAST)

001: MSFRGLSRPN AISGMGVADE SKTTFLELQR KKTHRYVVFK IDESKKEVVV EKTGNPTESY DDFLASLPDN DCRYAVYDFD FVTSENCQKS KIFFFAWSPS
101: TSGIRAKVLY STSKDQLSRE LQGIHYEIQA TDPTEVDLEV LRERAN

Arabidopsis Description

ADF6Actin-depolymerizing factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.