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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • plastid 3
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G423800.1 Wheat golgi 72.5 100.0
TraesCS5A01G416100.1 Wheat cytosol 71.5 98.62
Os03t0780400-01 Rice plastid 68.5 94.48
Zm00001d013141_P001 Maize cytosol 66.5 91.72
EER90794 Sorghum cytosol 66.5 91.72
Zm00001d034326_P001 Maize cytosol 58.5 88.64
GSMUA_Achr2P17320_001 Banana cytosol 58.0 80.0
GSMUA_Achr7P16650_001 Banana cytosol 38.0 79.17
GSMUA_Achr7P00900_001 Banana cytosol 50.0 75.76
VIT_05s0049g00980.t01 Wine grape cytosol 53.5 74.83
VIT_07s0005g03310.t01 Wine grape cytosol 53.0 74.13
KRH51874 Soybean cytosol 43.0 73.5
Solyc09g072590.2.1 Tomato cytosol 53.0 73.1
GSMUA_Achr2P13120_001 Banana cytosol 52.5 72.41
AT2G31200.1 Thale cress cytosol 52.0 71.23
KRH34385 Soybean cytosol 52.5 70.95
KRH67374 Soybean cytosol 51.5 70.55
Bra018268.1-P Field mustard mitochondrion 51.5 70.55
CDY10786 Canola cytosol 51.5 70.55
KRG92420 Soybean cytosol 52.0 70.27
CDY24750 Canola cytosol 51.0 69.86
KRG95660 Soybean cytosol 51.0 69.86
Solyc09g090110.2.1 Tomato cytosol 50.0 68.97
PGSC0003DMT400044218 Potato cytosol 50.0 68.97
Solyc09g072600.1.1 Tomato cytosol 15.0 61.22
PGSC0003DMT400026656 Potato mitochondrion 53.0 58.56
HORVU0Hr1G000200.1 Barley cytosol 40.0 57.55
Zm00001d034024_P001 Maize cytosol, plastid 41.5 53.9
HORVU2Hr1G053570.1 Barley cytosol 36.5 52.52
HORVU4Hr1G063830.6 Barley cytosol 36.0 50.35
HORVU1Hr1G048450.4 Barley cytosol 39.0 49.37
HORVU2Hr1G053580.1 Barley mitochondrion 37.0 48.37
HORVU5Hr1G113010.1 Barley cytosol, plastid 28.0 38.1
HORVU5Hr1G045750.1 Barley cytosol 31.5 35.39
HORVU5Hr1G045770.1 Barley plastid 31.0 34.25
HORVU5Hr1G113020.2 Barley cytosol 16.0 30.77
HORVU5Hr1G113060.1 Barley mitochondrion 32.5 29.02
HORVU2Hr1G097130.3 Barley cytosol 27.0 28.57
Protein Annotations
MapMan:20.2.2.8Gene3D:3.40.20.10UniProt:A0A287SHQ9InterPro:ADF-HInterPro:ADF-H/Gelsolin-like_dom_sfInterPro:ADF/Cofilin
GO:GO:0003674GO:GO:0003779GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005856GO:GO:0008150GO:GO:0009987GO:GO:0015629GO:GO:0016043
GO:GO:0030042EnsemblPlantsGene:HORVU5Hr1G100770EnsemblPlants:HORVU5Hr1G100770.1InterPro:IPR002108InterPro:IPR029006PFAM:PF00241
PFscan:PS51263PANTHER:PTHR11913PANTHER:PTHR11913:SF26SMART:SM00102SUPFAM:SSF55753UniParc:UPI000B460F29
SEG:seg:::::
Description
No Description!
Coordinates
chrchr5H:+:611996487..612000071
Molecular Weight (calculated)
22689.6 Da
IEP (calculated)
8.314
GRAVY (calculated)
-0.789
Length
200 amino acids
Sequence
(BLAST)
001: RTPRSEPSSS SPHTNGRSQQ RSAPPRKKEN SNGKNNLPPS ACDRRGAAAH LCPDPMAFMR TSSNASSGMG VAPDIRETFL ELQMKKAFRY VIFKIEEKQK
101: QVVVEKTGAT TESYDDFLAC LPENDCRYAL YDFDFVTGEN VQKSKIFFIA WSPDTSRIRA KMLYSTSKDR IKQELDGFHY EIQATDPTEV ELDVLRDRAH
Best Arabidopsis Sequence Match ( AT2G31200.1 )
(BLAST)
001: MSFRGLSRPN AISGMGVADE SKTTFLELQR KKTHRYVVFK IDESKKEVVV EKTGNPTESY DDFLASLPDN DCRYAVYDFD FVTSENCQKS KIFFFAWSPS
101: TSGIRAKVLY STSKDQLSRE LQGIHYEIQA TDPTEVDLEV LRERAN
Arabidopsis Description
ADF6Actin-depolymerizing factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.