CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92420	Soybean	cytosol	100.0	79.05
KRH34385	Soybean	cytosol	98.29	77.7
VIT_05s0049g00980.t01	Wine grape	cytosol	94.87	77.62
Solyc09g090110.2.1	Tomato	cytosol	88.03	71.03
KRH67374	Soybean	cytosol	88.03	70.55
PGSC0003DMT400044218	Potato	cytosol	86.32	69.66
KRG95660	Soybean	cytosol	85.47	68.49
Zm00001d034326_P001	Maize	cytosol	73.5	65.15
Os12t0628100-01	Rice	extracellular	78.63	63.45
Os03t0780400-01	Rice	plastid	77.78	62.76
KRH29274	Soybean	cytosol	70.09	62.12
EER90794	Sorghum	cytosol	76.92	62.07
Zm00001d013141_P001	Maize	cytosol	76.07	61.38
TraesCS5D01G423800.1	Wheat	golgi	73.5	59.31
TraesCS5A01G416100.1	Wheat	cytosol	72.65	58.62
KRH19714	Soybean	nucleus	67.52	56.83
KRH24296	Soybean	cytosol, plastid	69.23	56.64
KRH51402	Soybean	cytosol	68.38	55.94
Os10t0521100-01	Rice	cytosol	71.79	55.63
TraesCS1B01G197600.1	Wheat	cytosol	70.94	55.33
TraesCS1D01G186600.1	Wheat	cytosol	70.94	54.97
KRH32309	Soybean	cytosol, nucleus	67.52	54.86
KRH41156	Soybean	cytosol	60.68	54.62
TraesCS1A01G183100.2	Wheat	cytosol	70.94	53.55
HORVU1Hr1G048450.4	Barley	cytosol	70.94	52.53
KRH11708	Soybean	mitochondrion	62.39	52.52
KRH36708	Soybean	mitochondrion	62.39	52.52
KRG91521	Soybean	cytosol	60.68	51.82
KRH35309	Soybean	cytosol	60.68	51.82
GSMUA_Achr1P09160_001	Banana	cytosol	86.32	51.79
KRH27939	Soybean	cytosol	59.83	51.09
KRH77527	Soybean	cytosol	58.97	50.37
KXG39048	Sorghum	plastid	70.94	43.92
HORVU5Hr1G100770.1	Barley	cytosol, plastid	73.5	43.0
KRH59855	Soybean	endoplasmic reticulum, extracellular	59.83	41.42
Zm00001d029656_P003	Maize	cytosol	69.23	38.57
Zm00001d034024_P001	Maize	cytosol, plastid	41.88	31.82
Os07t0297500-00	Rice	cytosol	47.86	24.14

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	UniProt:A0A0R0JF93	EMBL:ACUP02003395	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf
InterPro:ADF/Cofilin	EnsemblPlantsGene:GLYMA_06G033400	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0008150	GO:GO:0009987
GO:GO:0015629	GO:GO:0016043	GO:GO:0030042	InterPro:IPR002108	InterPro:IPR029006	EnsemblPlants:KRH51874
ProteinID:KRH51874	ProteinID:KRH51874.1	PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF20
SMART:SM00102	SUPFAM:SSF55753	UniParc:UPI0006EDE975	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr6:+:2580425..2582253

Molecular Weight (calculated)

13801.4 Da

IEP (calculated)

8.199

GRAVY (calculated)

-0.662

Length

117 amino acids

Sequence
(BLAST)

001: RKKVHRYVIF KIDEKKKEVI VEKTGGPAES YDDFTASLPE NDCRYAVFDF DFVTSENCQK SKIFFIAWSP SVARIRPKML YATSKDRFRR ELQGIHYEIQ
101: ATDPTEMDLE VLRERAN

Best Arabidopsis Sequence Match ( AT2G31200.1 )
(BLAST)

001: MSFRGLSRPN AISGMGVADE SKTTFLELQR KKTHRYVVFK IDESKKEVVV EKTGNPTESY DDFLASLPDN DCRYAVYDFD FVTSENCQKS KIFFFAWSPS
101: TSGIRAKVLY STSKDQLSRE LQGIHYEIQA TDPTEVDLEV LRERAN

Arabidopsis Description

ADF6Actin-depolymerizing factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.