Factsheet for TraesCS1A01G183100.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G197600.1	Wheat	cytosol	90.97	94.0
TraesCS1D01G186600.1	Wheat	cytosol	90.32	92.72
HORVU1Hr1G048450.4	Barley	cytosol	90.97	89.24
Os10t0521100-01	Rice	cytosol	83.87	86.09
KXG39048	Sorghum	plastid	87.1	71.43
KRH51874	Soybean	cytosol	53.55	70.94
VIT_07s0005g03310.t01	Wine grape	cytosol	60.0	65.03
Zm00001d029656_P003	Maize	cytosol	87.74	64.76
VIT_05s0049g00980.t01	Wine grape	cytosol	59.35	64.34
KRH34385	Soybean	cytosol	60.65	63.51
KRH67374	Soybean	cytosol	59.35	63.01
KRG92420	Soybean	cytosol	60.0	62.84
Solyc09g072590.2.1	Tomato	cytosol	58.06	62.07
KRG95660	Soybean	cytosol	58.06	61.64
PGSC0003DMT400044218	Potato	cytosol	56.77	60.69
Solyc09g090110.2.1	Tomato	cytosol	56.77	60.69
AT2G31200.1	Thale cress	cytosol	56.13	59.59
Bra018268.1-P	Field mustard	mitochondrion	55.48	58.9
CDY10786	Canola	cytosol	55.48	58.9
CDY24750	Canola	cytosol	54.84	58.22
TraesCS5A01G416100.1	Wheat	cytosol	50.32	53.79
TraesCS4A01G071400.1	Wheat	cytosol	47.74	51.75
TraesCS2A01G227300.1	Wheat	cytosol	45.81	51.08
TraesCS6A01G247000.1	Wheat	cytosol	45.81	51.08
Solyc09g072600.1.1	Tomato	cytosol	16.13	51.02
PGSC0003DMT400026656	Potato	mitochondrion	58.71	50.28
TraesCS5A01G478800.1	Wheat	cytosol	40.65	42.86
TraesCS5A01G478900.1	Wheat	golgi, nucleus, plastid, unclear	34.84	39.13
Os07t0297500-00	Rice	cytosol	55.48	37.07
TraesCS5A01G478500.1	Wheat	mitochondrion	40.65	31.5

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin	GO:GO:0003674
GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042
InterPro:IPR002108	InterPro:IPR029006	PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF25
SMART:SM00102	SUPFAM:SSF55753	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS1A01G183100	EnsemblPlants:TraesCS1A01G183100.2	TIGR:cd11286
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1A:-:331517342..331518917

Molecular Weight (calculated)

17595.7 Da

IEP (calculated)

5.042

GRAVY (calculated)

-0.379

Length

155 amino acids

Sequence
(BLAST)

001: MALAAAAALA WPCLGGNSPA WIDVPERSKS AFMELKRRKV HRYVIFKIDD STEEVVVEKT GAPGESYDDF TASLPVDDCR YAVYDLDFVS DDNCRKSKIF
101: FISWSPDDSR IRAKTIYAVS RNQFRHELDG VHFEIQATDP GDMDLEVLRV RANRT

Best Arabidopsis Sequence Match ( AT2G31200.1 )
(BLAST)

001: MSFRGLSRPN AISGMGVADE SKTTFLELQR KKTHRYVVFK IDESKKEVVV EKTGNPTESY DDFLASLPDN DCRYAVYDFD FVTSENCQKS KIFFFAWSPS
101: TSGIRAKVLY STSKDQLSRE LQGIHYEIQA TDPTEVDLEV LRERAN

Arabidopsis Description

ADF6Actin-depolymerizing factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.