Factsheet for TraesCS4A01G071400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G227300.1	Wheat	cytosol	100.0	100.0
TraesCS4D01G228100.1	Wheat	cytosol	99.3	99.3
HORVU4Hr1G063830.6	Barley	cytosol	96.5	96.5
Zm00001d028392_P001	Maize	cytosol	92.31	92.31
Os03t0243100-01	Rice	cytosol	90.91	90.91
GSMUA_Achr5P18890_001	Banana	cytosol, plastid	78.32	78.32
GSMUA_Achr11P...	Banana	cytosol, plastid	77.62	77.62
Zm00001d047942_P001	Maize	mitochondrion	90.91	75.58
CDX89737	Canola	cytosol	74.13	74.13
KRH24296	Soybean	cytosol, plastid	74.13	74.13
CDY02247	Canola	cytosol	74.13	74.13
Bra013058.1-P	Field mustard	cytosol	74.13	74.13
VIT_03s0038g02220.t01	Wine grape	cytosol	67.83	73.48
KRH29274	Soybean	cytosol	67.83	73.48
PGSC0003DMT400015865	Potato	cytosol	72.73	72.73
KRH51402	Soybean	cytosol	72.73	72.73
Solyc01g111380.2.1	Tomato	cytosol, plastid	72.73	72.73
AT2G16700.1	Thale cress	cytosol	71.33	71.33
AT4G34970.1	Thale cress	cytosol	67.83	68.79
CDX75477	Canola	cytosol	57.34	67.77
Bra017683.1-P	Field mustard	cytosol	62.94	66.67
CDX69101	Canola	cytosol	65.73	66.2
Bra011575.1-P	Field mustard	cytosol	65.73	66.2
CDX72508	Canola	cytosol	62.94	65.69
CDY40654	Canola	cytosol	55.94	65.04
GSMUA_Achr11P...	Banana	cytosol	76.22	64.5
OQU92928	Sorghum	cytosol, plastid	90.91	63.73
TraesCS6A01G247000.1	Wheat	cytosol	50.35	51.8
TraesCS1A01G183100.2	Wheat	cytosol	51.75	47.74
TraesCS5A01G416100.1	Wheat	cytosol	48.25	47.59
TraesCS2A01G227300.1	Wheat	cytosol	45.45	46.76
TraesCS5A01G478800.1	Wheat	cytosol	46.85	45.58
TraesCS5A01G478900.1	Wheat	golgi, nucleus, plastid, unclear	41.26	42.75
TraesCS5A01G478500.1	Wheat	mitochondrion	46.15	33.0

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin	GO:GO:0003674
GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042
InterPro:IPR002108	InterPro:IPR029006	PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF16
SMART:SM00102	SUPFAM:SSF55753	EnsemblPlantsGene:TraesCS4A01G071400	EnsemblPlants:TraesCS4A01G071400.1	TIGR:cd11286	:

Description

No Description!

Coordinates

chr4A:+:68689176..68691086

Molecular Weight (calculated)

16530.0 Da

IEP (calculated)

8.797

GRAVY (calculated)

-0.345

Length

143 amino acids

Sequence
(BLAST)

001: MAMAYKMATE GMNIKEECKR WFTEMKWKKV HRFVVYKIDE RTRAVLVDKV GGPGEGYDEL VAALPGDDCR YAVFDFDFVS VDNCQKSKIF FIAWSPAASR
101: IRAKILYATS KQGLRRVLEG VHYEVQATER SEMGFDVIRE RAQ

Best Arabidopsis Sequence Match ( AT2G16700.1 )
(BLAST)

001: MAMAFKMATT GMRVTDECTS SFMDMKWKKV HRYIVFKIEE KSRKVTVDKV GGAGESYHDL EDSLPVDDCR YAVFDFDFVT VDNCRKSKIF FIAWSPEASK
101: IRAKILYATS KDGLRRVLEG IHYELQATDP TEMGFDIIQD RAK

Arabidopsis Description

ADF5ATADF5 [Source:UniProtKB/TrEMBL;Acc:A0A178VPY9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.