Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G491500.1 | Wheat | cytosol | 69.5 | 97.89 |
| HORVU5Hr1G045770.1 | Barley | plastid | 75.5 | 83.43 |
| TraesCS5D01G491900.1 | Wheat | plastid | 92.5 | 78.72 |
| HORVU5Hr1G113060.1 | Barley | mitochondrion | 85.0 | 75.89 |
| TraesCS5A01G478800.1 | Wheat | cytosol | 53.0 | 72.11 |
| Os03t0820500-01 | Rice | plastid | 48.5 | 64.67 |
| Zm00001d034643_P001 | Maize | cytosol | 43.5 | 58.39 |
| TraesCS6A01G247000.1 | Wheat | cytosol | 35.5 | 51.08 |
| TraesCS4A01G071400.1 | Wheat | cytosol | 33.0 | 46.15 |
| TraesCS2A01G227300.1 | Wheat | cytosol | 32.0 | 46.04 |
| TraesCS5A01G478900.1 | Wheat | golgi, nucleus, plastid, unclear | 30.5 | 44.2 |
| KXG37257 | Sorghum | cytosol, plastid | 46.5 | 44.08 |
| TraesCS5A01G416100.1 | Wheat | cytosol | 29.5 | 40.69 |
| TraesCS1A01G183100.2 | Wheat | cytosol | 31.5 | 40.65 |
Protein Annotations
| MapMan:20.2.2.8 | Gene3D:3.40.20.10 | InterPro:ADF-H | InterPro:ADF-H/Gelsolin-like_dom_sf | InterPro:ADF/Cofilin | GO:GO:0003674 |
| GO:GO:0003779 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005856 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015629 | GO:GO:0016043 | GO:GO:0030042 |
| InterPro:IPR002108 | InterPro:IPR029006 | PFAM:PF00241 | PFscan:PS51263 | PANTHER:PTHR11913 | PANTHER:PTHR11913:SF51 |
| SMART:SM00102 | SUPFAM:SSF55753 | EnsemblPlantsGene:TraesCS5A01G478500 | EnsemblPlants:TraesCS5A01G478500.1 | TIGR:cd11286 | SEG:seg |
Description
No Description!
Coordinates
chr5A:+:651826312..651827012
Molecular Weight (calculated)
22274.8 Da
IEP (calculated)
4.886
GRAVY (calculated)
-0.557
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLSRRHGHG PPIKSPYQTL LNQQHSSHPT ISFQSSYQFP SQHQHTDFSS GQPPDPSTMA NSVSGVAVNE ECVKVFQELR AERKHRFVVY KMDDDAQQVV
101: VDKVGALDAT FDDLAAAMPA DDCRYAVYDL DFVSEDSAGD TPRSKIFFIH WSPESADARN KMLYASSTEG LKKELDGVQI DVQATDASEL TLNILKDYTT
101: VDKVGALDAT FDDLAAAMPA DDCRYAVYDL DFVSEDSAGD TPRSKIFFIH WSPESADARN KMLYASSTEG LKKELDGVQI DVQATDASEL TLNILKDYTT
001: MANSASGMHV SDECKLKFLE LKAKRNYRFI VFKIDEKAQQ VMIDKLGNPE ETYEDFTRSI PEDECRYAVY DYDFTTPENC QKSKIFFIAW SPDTSRVRSK
101: MLYASSKDRF KRELDGIQVE LQATDPSEMS LDIIKGRVNL
101: MLYASSKDRF KRELDGIQVE LQATDPSEMS LDIIKGRVNL
Arabidopsis Description
ADF11actin depolymerizing factor 11 [Source:TAIR;Acc:AT1G01750]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.