Factsheet for Os03t0820500-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

plastid: 27992503

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G491800.1	Wheat	cytosol	78.67	80.27
TraesCS5D01G492300.1	Wheat	cytosol	76.67	78.23
TraesCS5A01G478800.1	Wheat	cytosol	76.67	78.23
Zm00001d034643_P001	Maize	cytosol	74.0	74.5
TraesCS5B01G491500.1	Wheat	cytosol	66.0	69.72
HORVU5Hr1G045750.1	Barley	cytosol	77.33	65.17
HORVU5Hr1G045770.1	Barley	plastid	67.33	55.8
KXG37257	Sorghum	cytosol, plastid	78.0	55.45
Os04t0555700-01	Rice	plasma membrane	51.33	55.4
Os07t0484200-01	Rice	plasma membrane	49.33	53.24
Os05t0113400-01	Rice	cytosol, extracellular, plastid	48.0	52.17
HORVU5Hr1G113020.2	Barley	cytosol	35.33	50.96
Os03t0820600-01	Rice	cytosol, extracellular, plastid	46.0	49.64
TraesCS5A01G478500.1	Wheat	mitochondrion	64.67	48.5
Os03t0243100-01	Rice	cytosol	45.33	47.55
Os12t0628100-01	Rice	extracellular	45.33	46.9
HORVU5Hr1G113060.1	Barley	mitochondrion	67.33	45.09
TraesCS5D01G491900.1	Wheat	plastid	66.0	42.13
Os10t0521100-01	Rice	cytosol	42.0	41.72
Os03t0780400-01	Rice	plastid	39.33	40.69
Os07t0297500-00	Rice	cytosol	33.33	21.55

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	EntrezGene:4334594	ProteinID:AAO65861.1	ProteinID:ABF99587.1	InterPro:ADF-H
InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin	EMBL:AK241081	ProteinID:BAF13634.1	ProteinID:BAS87083.1	ProteinID:EAZ29084.1
GO:GO:0003674	GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005856	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043
GO:GO:0030042	InterPro:IPR002108	InterPro:IPR029006	EnsemblPlantsGene:Os03g0820500	EnsemblPlants:Os03t0820500-01	PFAM:PF00241
PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF51	UniProt:Q84TB6	SMART:SM00102	SUPFAM:SSF55753
UniParc:UPI00000560EB	RefSeq:XP_015632173.1	SEG:seg	:	:	:

Description

actin depolymerizing factor 3Similar to WCOR719. (Os03t0820500-01)

Coordinates

chr3:+:34430457..34431364

Molecular Weight (calculated)

16176.8 Da

IEP (calculated)

4.685

GRAVY (calculated)

-0.262

Length

150 amino acids

Sequence
(BLAST)

001: MANATSGVAV SEECKARFQE LRAGRAHRFV VFKIDDAMRQ VVVDRVGPRD AGFDELTASL PADGCRYAVY DHDFTVSDAT ATAAAGEGGE APRSKIFFVS
101: WSPAAADVRS KMVYASSNEG FKKELDGVQI DLQATDPSEL TLDVLKDHTS

Best Arabidopsis Sequence Match ( AT1G01750.1 )
(BLAST)

001: MANSASGMHV SDECKLKFLE LKAKRNYRFI VFKIDEKAQQ VMIDKLGNPE ETYEDFTRSI PEDECRYAVY DYDFTTPENC QKSKIFFIAW SPDTSRVRSK
101: MLYASSKDRF KRELDGIQVE LQATDPSEMS LDIIKGRVNL

Arabidopsis Description

ADF11actin depolymerizing factor 11 [Source:TAIR;Acc:AT1G01750]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.