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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G491800.1 Wheat cytosol 79.78 96.6
TraesCS5A01G478800.1 Wheat cytosol 79.21 95.92
TraesCS5D01G492300.1 Wheat cytosol 78.09 94.56
Os03t0820500-01 Rice plastid 65.17 77.33
Zm00001d034643_P001 Maize cytosol 59.55 71.14
HORVU5Hr1G113020.2 Barley cytosol 37.64 64.42
HORVU5Hr1G045770.1 Barley plastid 62.92 61.88
KXG37257 Sorghum cytosol, plastid 64.04 54.03
HORVU0Hr1G000200.1 Barley cytosol 41.01 52.52
HORVU5Hr1G113060.1 Barley mitochondrion 65.73 52.23
HORVU4Hr1G063830.6 Barley cytosol 38.2 47.55
HORVU2Hr1G053570.1 Barley cytosol 37.08 47.48
HORVU2Hr1G053580.1 Barley mitochondrion 36.52 42.48
HORVU5Hr1G113010.1 Barley cytosol, plastid 33.15 40.14
HORVU1Hr1G048450.4 Barley cytosol 35.39 39.87
HORVU5Hr1G100770.1 Barley cytosol, plastid 35.39 31.5
HORVU2Hr1G097130.3 Barley cytosol 28.65 26.98
Protein Annotations
MapMan:20.2.2.8Gene3D:3.40.20.10UniProt:A0A287R124InterPro:ADF-HInterPro:ADF-H/Gelsolin-like_dom_sfInterPro:ADF/Cofilin
GO:GO:0003674GO:GO:0003779GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005856GO:GO:0008150GO:GO:0009987GO:GO:0015629GO:GO:0016043
GO:GO:0030042EnsemblPlantsGene:HORVU5Hr1G045750EnsemblPlants:HORVU5Hr1G045750.1InterPro:IPR002108InterPro:IPR029006PFAM:PF00241
PFscan:PS51263PANTHER:PTHR11913PANTHER:PTHR11913:SF51SMART:SM00102SUPFAM:SSF55753UniParc:UPI000B488DD4
SEG:seg:::::
Description
No Description!
Coordinates
chrchr5H:-:354860431..354861403
Molecular Weight (calculated)
19410.6 Da
IEP (calculated)
5.558
GRAVY (calculated)
-0.424
Length
178 amino acids
Sequence
(BLAST)
001: NGTPLRNTRT SSLLQHHHKD LDFPEPTSRH SMANAVSGVA VSEECVRAFQ ELRAGRAHRF VVYKMDDAVH RVVVDKVGGR DAGFDDLAAA LPADDCRYAV
101: YDLDFTVGDA TAKGADGEAP RSKIFFISWS PTSAEVKSKM VYASSNEGFK KELDGTQIDV QATDPGELTL DILKDHAT
Best Arabidopsis Sequence Match ( AT1G01750.1 )
(BLAST)
001: MANSASGMHV SDECKLKFLE LKAKRNYRFI VFKIDEKAQQ VMIDKLGNPE ETYEDFTRSI PEDECRYAVY DYDFTTPENC QKSKIFFIAW SPDTSRVRSK
101: MLYASSKDRF KRELDGIQVE LQATDPSEMS LDIIKGRVNL
Arabidopsis Description
ADF11actin depolymerizing factor 11 [Source:TAIR;Acc:AT1G01750]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.