Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G227300.1 | Wheat | cytosol | 97.84 | 97.84 |
| TraesCS2B01G255200.1 | Wheat | cytosol | 97.12 | 97.12 |
| TraesCS2D01G235200.1 | Wheat | cytosol | 97.12 | 97.12 |
| HORVU2Hr1G053580.1 | Barley | mitochondrion | 99.28 | 90.2 |
| Os07t0484200-01 | Rice | plasma membrane | 85.61 | 85.61 |
| EER97221 | Sorghum | cytosol | 82.01 | 82.01 |
| HORVU0Hr1G000200.1 | Barley | cytosol | 65.47 | 65.47 |
| HORVU4Hr1G063830.6 | Barley | cytosol | 49.64 | 48.25 |
| HORVU1Hr1G048450.4 | Barley | cytosol | 51.08 | 44.94 |
| HORVU5Hr1G113010.1 | Barley | cytosol, plastid | 46.76 | 44.22 |
| HORVU2Hr1G097130.3 | Barley | cytosol | 51.08 | 37.57 |
| HORVU5Hr1G045750.1 | Barley | cytosol | 47.48 | 37.08 |
| HORVU5Hr1G100770.1 | Barley | cytosol, plastid | 52.52 | 36.5 |
| HORVU5Hr1G045770.1 | Barley | plastid | 46.04 | 35.36 |
| HORVU5Hr1G113020.2 | Barley | cytosol | 22.3 | 29.81 |
| HORVU5Hr1G113060.1 | Barley | mitochondrion | 46.04 | 28.57 |
Protein Annotations
| MapMan:20.2.2.8 | Gene3D:3.40.20.10 | InterPro:ADF-H | InterPro:ADF-H/Gelsolin-like_dom_sf | InterPro:ADF/Cofilin | EMBL:AK374152 |
| UniProt:F2EDC7 | GO:GO:0003674 | GO:GO:0003779 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015629 |
| GO:GO:0016043 | GO:GO:0030042 | EnsemblPlantsGene:HORVU2Hr1G053570 | EnsemblPlants:HORVU2Hr1G053570.1 | InterPro:IPR002108 | InterPro:IPR029006 |
| PFAM:PF00241 | PFscan:PS51263 | PANTHER:PTHR11913 | PANTHER:PTHR11913:SF23 | SMART:SM00102 | SUPFAM:SSF55753 |
| UniParc:UPI0002008598 | : | : | : | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2EDC7]
Coordinates
chrchr2H:-:328171139..328176271
Molecular Weight (calculated)
16126.0 Da
IEP (calculated)
6.518
GRAVY (calculated)
-0.579
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: MANSASGLAV HDDCKIKFSD LKARRSFRFI VFKIDEKTME IKVERLGETS YGYEEFTNSL PANECRYAVY DLDFVTDENC QKSKIFFFSW SPDTARTRSK
101: MLYASSKDRF RREMDGIQCE IQATDPSEMS LDIIKGRAH
101: MLYASSKDRF RREMDGIQCE IQATDPSEMS LDIIKGRAH
001: MANSASGMHV NDECKIKFLE LKAKRTYRFI VFKIDEKAQQ VQIEKLGNPE ETYDDFTSSI PDDECRYAVY DFDFTTEDNC QKSKIFFIAW SPDTSRVRSK
101: MLYASSKDRF KREMEGIQVE LQATDPSEMS LDIIKGRLNL
101: MLYASSKDRF KREMEGIQVE LQATDPSEMS LDIIKGRLNL
Arabidopsis Description
ADF8actin depolymerizing factor 8 [Source:TAIR;Acc:AT4G00680]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.