Factsheet for HORVU1Hr1G048450.4

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G197600.1	Wheat	cytosol	94.3	99.33
TraesCS1D01G186600.1	Wheat	cytosol	93.67	98.01
TraesCS1A01G183100.2	Wheat	cytosol	89.24	90.97
Os10t0521100-01	Rice	cytosol	86.08	90.07
KXG39048	Sorghum	plastid	88.61	74.07
KRH51874	Soybean	cytosol	52.53	70.94
VIT_07s0005g03310.t01	Wine grape	cytosol	59.49	65.73
VIT_05s0049g00980.t01	Wine grape	cytosol	58.86	65.03
Zm00001d029656_P003	Maize	cytosol	86.08	64.76
KRH67374	Soybean	cytosol	58.86	63.7
KRH34385	Soybean	cytosol	59.49	63.51
Solyc09g072590.2.1	Tomato	cytosol	58.23	63.45
KRG92420	Soybean	cytosol	58.86	62.84
KRG95660	Soybean	cytosol	57.59	62.33
Solyc09g090110.2.1	Tomato	cytosol	56.33	61.38
PGSC0003DMT400044218	Potato	cytosol	56.33	61.38
AT2G31200.1	Thale cress	cytosol	55.7	60.27
Bra018268.1-P	Field mustard	mitochondrion	55.06	59.59
CDY10786	Canola	cytosol	55.06	59.59
CDY24750	Canola	cytosol	54.43	58.9
HORVU4Hr1G063830.6	Barley	cytosol	48.1	53.15
Solyc09g072600.1.1	Tomato	cytosol	16.46	53.06
PGSC0003DMT400026656	Potato	mitochondrion	58.86	51.38
HORVU2Hr1G053570.1	Barley	cytosol	44.94	51.08
HORVU0Hr1G000200.1	Barley	cytosol	44.3	50.36
HORVU2Hr1G053580.1	Barley	mitochondrion	44.94	46.41
HORVU5Hr1G100770.1	Barley	cytosol, plastid	49.37	39.0
Os07t0297500-00	Rice	cytosol	53.8	36.64
HORVU5Hr1G045750.1	Barley	cytosol	39.87	35.39
HORVU5Hr1G045770.1	Barley	plastid	40.51	35.36
HORVU5Hr1G113010.1	Barley	cytosol, plastid	28.48	30.61
HORVU5Hr1G113020.2	Barley	cytosol	19.62	29.81
HORVU2Hr1G097130.3	Barley	cytosol	34.18	28.57
HORVU5Hr1G113060.1	Barley	mitochondrion	40.51	28.57

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	UniProt:A0A287FGA2	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin
GO:GO:0003674	GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005856	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043
GO:GO:0030042	EnsemblPlantsGene:HORVU1Hr1G048450	EnsemblPlants:HORVU1Hr1G048450.4	InterPro:IPR002108	InterPro:IPR029006	PFAM:PF00241
PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF25	SMART:SM00102	SUPFAM:SSF55753	UniParc:UPI000B484CA7

Description

No Description!

Coordinates

chrchr1H:+:358992509..358994562

Molecular Weight (calculated)

18158.2 Da

IEP (calculated)

4.897

GRAVY (calculated)

-0.526

Length

158 amino acids

Sequence
(BLAST)

001: LSGNRSSAME FLGFTLMGGN SPAWIDVPER SKSAFMELKR RKVHRYVIFK IDDSTEEVVV EKTGSPGESY DDFTASLPVD DCRYAVYDLD FVSDDNCRKS
101: KIFFISWSPD DSRIRAKTIY AVSRNQFRHE LDGVHFEIQA TDPDDMDLEV LRVRANRT

Best Arabidopsis Sequence Match ( AT2G31200.1 )
(BLAST)

001: MSFRGLSRPN AISGMGVADE SKTTFLELQR KKTHRYVVFK IDESKKEVVV EKTGNPTESY DDFLASLPDN DCRYAVYDFD FVTSENCQKS KIFFFAWSPS
101: TSGIRAKVLY STSKDQLSRE LQGIHYEIQA TDPTEVDLEV LRERAN

Arabidopsis Description

ADF6Actin-depolymerizing factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.