CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH51874	Soybean	cytosol	77.7	98.29
KRG92420	Soybean	cytosol	97.97	97.97
VIT_05s0049g00980.t01	Wine grape	cytosol	89.19	92.31
Solyc09g090110.2.1	Tomato	cytosol	81.76	83.45
KRH67374	Soybean	cytosol	81.76	82.88
PGSC0003DMT400044218	Potato	cytosol	80.41	82.07
KRG95660	Soybean	cytosol	80.41	81.51
Os12t0628100-01	Rice	extracellular	75.0	76.55
Os03t0780400-01	Rice	plastid	74.32	75.86
EER90794	Sorghum	cytosol	72.97	74.48
Zm00001d013141_P001	Maize	cytosol	72.3	73.79
Zm00001d034326_P001	Maize	cytosol	64.86	72.73
TraesCS5D01G423800.1	Wheat	golgi	70.95	72.41
TraesCS5A01G416100.1	Wheat	cytosol	70.27	71.72
KRH29274	Soybean	cytosol	57.43	64.39
GSMUA_Achr1P09160_001	Banana	cytosol	83.78	63.59
Os10t0521100-01	Rice	cytosol	64.19	62.91
TraesCS1B01G197600.1	Wheat	cytosol	63.51	62.67
KRH19714	Soybean	nucleus	58.78	62.59
TraesCS1D01G186600.1	Wheat	cytosol	63.51	62.25
TraesCS1A01G183100.2	Wheat	cytosol	63.51	60.65
KRH32309	Soybean	cytosol, nucleus	58.78	60.42
KRH24296	Soybean	cytosol, plastid	58.11	60.14
HORVU1Hr1G048450.4	Barley	cytosol	63.51	59.49
KRH35309	Soybean	cytosol	54.73	59.12
KRG91521	Soybean	cytosol	54.73	59.12
KRH51402	Soybean	cytosol	56.76	58.74
KRH41156	Soybean	cytosol	51.35	58.46
KRH11708	Soybean	mitochondrion	54.73	58.27
KRH36708	Soybean	mitochondrion	54.73	58.27
KRH27939	Soybean	cytosol	53.38	57.66
KRH77527	Soybean	cytosol	52.7	56.93
HORVU5Hr1G100770.1	Barley	cytosol, plastid	70.95	52.5
KXG39048	Sorghum	plastid	62.84	49.21
KRH59855	Soybean	endoplasmic reticulum, extracellular	53.38	46.75
Zm00001d029656_P003	Maize	cytosol	60.81	42.86
Zm00001d034024_P001	Maize	cytosol, plastid	42.57	40.91
Os07t0297500-00	Rice	cytosol	43.24	27.59

Protein Annotations

EntrezGene:100305927	MapMan:20.2.2.8	Gene3D:3.40.20.10	EMBL:ACUP02006594	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf
InterPro:ADF/Cofilin	EMBL:BT089768	UniProt:C6SX74	EnsemblPlantsGene:GLYMA_10G180700	GO:GO:0003674	GO:GO:0003779
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042	InterPro:IPR002108
InterPro:IPR029006	EnsemblPlants:KRH34385	ProteinID:KRH34385	ProteinID:KRH34385.1	PFAM:PF00241	PFscan:PS51263
PANTHER:PTHR11913	PANTHER:PTHR11913:SF20	SMART:SM00102	SUPFAM:SSF55753	UniParc:UPI0001B1520E	SEG:seg

Description

hypothetical protein

Coordinates

chr10:-:41424341..41428668

Molecular Weight (calculated)

16808.9 Da

IEP (calculated)

7.506

GRAVY (calculated)

-0.467

Length

148 amino acids

Sequence
(BLAST)

001: MAFRVGGAGG GNASSGMGVA EHSVSTFLEL QRKKVHRYVI FKIDEKKKEV VVEKTGGPAE SYDDFTASLP ENDCRYAIFD FDFVTSENCQ KSKIFFIAWS
101: PSVARIRPKM LYATSKDRFR RELQGIHYEI QATDPTEMDL EVLRERAN

Best Arabidopsis Sequence Match ( AT2G31200.1 )
(BLAST)

001: MSFRGLSRPN AISGMGVADE SKTTFLELQR KKTHRYVVFK IDESKKEVVV EKTGNPTESY DDFLASLPDN DCRYAVYDFD FVTSENCQKS KIFFFAWSPS
101: TSGIRAKVLY STSKDQLSRE LQGIHYEIQA TDPTEVDLEV LRERAN

Arabidopsis Description

ADF6Actin-depolymerizing factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.