Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g090110.2.1 | Tomato | cytosol | 98.62 | 98.62 |
| VIT_05s0049g00980.t01 | Wine grape | cytosol | 86.9 | 88.11 |
| KRH51874 | Soybean | cytosol | 69.66 | 86.32 |
| KRG92420 | Soybean | cytosol | 82.07 | 80.41 |
| KRH34385 | Soybean | cytosol | 82.07 | 80.41 |
| Os12t0628100-01 | Rice | extracellular | 71.03 | 71.03 |
| Os03t0780400-01 | Rice | plastid | 70.34 | 70.34 |
| EER90794 | Sorghum | cytosol | 69.66 | 69.66 |
| Zm00001d013141_P001 | Maize | cytosol | 68.97 | 68.97 |
| TraesCS5D01G423800.1 | Wheat | golgi | 68.97 | 68.97 |
| Zm00001d034326_P001 | Maize | cytosol | 62.07 | 68.18 |
| TraesCS5A01G416100.1 | Wheat | cytosol | 67.59 | 67.59 |
| GSMUA_Achr1P09160_001 | Banana | cytosol | 82.07 | 61.03 |
| PGSC0003DMT400026656 | Potato | mitochondrion | 75.86 | 60.77 |
| PGSC0003DMT400023061 | Potato | cytosol | 57.93 | 60.43 |
| PGSC0003DMT400028567 | Potato | cytosol | 57.24 | 59.71 |
| TraesCS1B01G197600.1 | Wheat | cytosol | 61.38 | 59.33 |
| TraesCS1D01G186600.1 | Wheat | cytosol | 61.38 | 58.94 |
| PGSC0003DMT400015865 | Potato | cytosol | 57.93 | 58.74 |
| PGSC0003DMT400000464 | Potato | cytosol | 55.17 | 58.39 |
| Os10t0521100-01 | Rice | cytosol | 60.69 | 58.28 |
| PGSC0003DMT400076911 | Potato | cytosol | 55.17 | 57.97 |
| PGSC0003DMT400037205 | Potato | cytosol | 53.79 | 56.93 |
| TraesCS1A01G183100.2 | Wheat | cytosol | 60.69 | 56.77 |
| PGSC0003DMT400071339 | Potato | cytosol | 55.86 | 56.64 |
| HORVU1Hr1G048450.4 | Barley | cytosol | 61.38 | 56.33 |
| PGSC0003DMT400087280 | Potato | cytosol | 52.41 | 55.88 |
| PGSC0003DMT400008913 | Potato | cytosol | 52.41 | 55.47 |
| PGSC0003DMT400026582 | Potato | mitochondrion | 51.72 | 53.96 |
| HORVU5Hr1G100770.1 | Barley | cytosol, plastid | 68.97 | 50.0 |
| KXG39048 | Sorghum | plastid | 60.69 | 46.56 |
| Zm00001d029656_P003 | Maize | cytosol | 59.31 | 40.95 |
| Zm00001d034024_P001 | Maize | cytosol, plastid | 42.76 | 40.26 |
| Os07t0297500-00 | Rice | cytosol | 42.76 | 26.72 |
Protein Annotations
| EntrezGene:102588600 | MapMan:20.2.2.8 | Gene3D:3.40.20.10 | EMBL:AB061248 | InterPro:ADF-H | InterPro:ADF-H/Gelsolin-like_dom_sf |
| InterPro:ADF/Cofilin | ProteinID:BAC23034 | ProteinID:BAC23034.1 | GO:GO:0003674 | GO:GO:0003779 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0015629 | GO:GO:0016043 | GO:GO:0030042 | InterPro:IPR002108 | InterPro:IPR029006 |
| RefSeq:NP_001275618.1 | PFAM:PF00241 | EnsemblPlantsGene:PGSC0003DMG400017171 | PGSC:PGSC0003DMG400017171 | EnsemblPlants:PGSC0003DMT400044218 | PFscan:PS51263 |
| PANTHER:PTHR11913 | PANTHER:PTHR11913:SF20 | UniProt:Q8H9D5 | SMART:SM00102 | SUPFAM:SSF55753 | UniParc:UPI00000AD0A7 |
Description
Actin depolymerizing factor 6 [Source:PGSC_GENE;Acc:PGSC0003DMG400017171]
Coordinates
chr9:-:56403395..56406923
Molecular Weight (calculated)
16851.9 Da
IEP (calculated)
6.534
GRAVY (calculated)
-0.603
Length
145 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFRIRGTNA SSGMGVADQS KATYMELQRK KVHRYVIFMI DEKKNEVVVE KTGGPAESYD DFTAALPEND CRYAVYDYDF VTPDNCQKSK IFFFAWSPSV
101: SRIRSKMLYA TSKDRFRREL EGIHYEIQAT DPTEVELEVL KERAY
101: SRIRSKMLYA TSKDRFRREL EGIHYEIQAT DPTEVELEVL KERAY
001: MSFRGLSRPN AISGMGVADE SKTTFLELQR KKTHRYVVFK IDESKKEVVV EKTGNPTESY DDFLASLPDN DCRYAVYDFD FVTSENCQKS KIFFFAWSPS
101: TSGIRAKVLY STSKDQLSRE LQGIHYEIQA TDPTEVDLEV LRERAN
101: TSGIRAKVLY STSKDQLSRE LQGIHYEIQA TDPTEVDLEV LRERAN
Arabidopsis Description
ADF6Actin-depolymerizing factor 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.