Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g035980.2.1 | Tomato | cytosol | 94.93 | 95.62 |
| KRG91521 | Soybean | cytosol | 84.78 | 85.4 |
| KRH35309 | Soybean | cytosol | 84.78 | 85.4 |
| PGSC0003DMT400037205 | Potato | cytosol | 81.88 | 82.48 |
| GSMUA_Achr4P29400_001 | Banana | cytosol | 55.07 | 77.55 |
| PGSC0003DMT400071339 | Potato | cytosol | 77.54 | 74.83 |
| PGSC0003DMT400023061 | Potato | cytosol | 75.36 | 74.82 |
| PGSC0003DMT400008913 | Potato | cytosol | 73.91 | 74.45 |
| PGSC0003DMT400028567 | Potato | cytosol | 74.64 | 74.1 |
| PGSC0003DMT400000464 | Potato | cytosol | 73.19 | 73.72 |
| PGSC0003DMT400087280 | Potato | cytosol | 72.46 | 73.53 |
| PGSC0003DMT400026582 | Potato | mitochondrion | 68.84 | 68.35 |
| PGSC0003DMT400015865 | Potato | cytosol | 57.25 | 55.24 |
| PGSC0003DMT400044218 | Potato | cytosol | 57.97 | 55.17 |
| PGSC0003DMT400026656 | Potato | mitochondrion | 60.87 | 46.41 |
Protein Annotations
| MapMan:20.2.2.8 | Gene3D:3.40.20.10 | InterPro:ADF-H | InterPro:ADF-H/Gelsolin-like_dom_sf | InterPro:ADF/Cofilin | GO:GO:0003674 |
| GO:GO:0003779 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005856 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015629 | GO:GO:0016043 | GO:GO:0030042 |
| InterPro:IPR002108 | InterPro:IPR029006 | UniProt:M1CXK7 | PFAM:PF00241 | EnsemblPlantsGene:PGSC0003DMG400029916 | PGSC:PGSC0003DMG400029916 |
| EnsemblPlants:PGSC0003DMT400076911 | PFscan:PS51263 | PANTHER:PTHR11913 | PANTHER:PTHR11913:SF33 | SMART:SM00102 | SUPFAM:SSF55753 |
| UniParc:UPI0002966560 | : | : | : | : | : |
Description
Pollen specific actin-depolymerizing factor 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400029916]
Coordinates
chr6:+:37400098..37401032
Molecular Weight (calculated)
15903.1 Da
IEP (calculated)
5.313
GRAVY (calculated)
-0.298
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MQANAASGMA VHDECKLKFL ELKAKRIYRF IIFKIDAQQV VVEKLGNPEE TYEDFTNALP ADECRYAVFD FDFVTNENCQ KSKIFFIAWS PDTSKVRMKM
101: VYASSKDRFK REIDGIQVEL QATDPSEMSL DIIKARAL
101: VYASSKDRFK REIDGIQVEL QATDPSEMSL DIIKARAL
001: MANAASGMAV EDECKLKFLE LKSKRNYRFI IFRIDGQQVV VEKLGNPDET YDDFTASLPA NECRYAVFDF DFITDENCQK SKIFFIAWSP DSSRVRMKMV
101: YASSKDRFKR ELDGIQVELQ ATDPSEMSFD IIKSRAL
101: YASSKDRFKR ELDGIQVELQ ATDPSEMSFD IIKSRAL
Arabidopsis Description
ADF7Actin-depolymerizing factor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q67ZM4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.