Factsheet for GSMUA_Achr4P29400_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32581	Canola	cytosol	45.92	83.33
GSMUA_Achr8P11370_001	Banana	cytosol	76.53	67.57
GSMUA_Achr11P...	Banana	cytosol	85.71	63.64
GSMUA_Achr11P...	Banana	cytosol	84.69	62.88
GSMUA_Achr1P00290_001	Banana	cytosol	83.67	62.12
CDX89411	Canola	cytosol	81.63	62.02
CDX94438	Canola	cytosol	81.63	62.02
CDY52365	Canola	cytosol	81.63	62.02
CDY31909	Canola	cytosol	80.61	60.77
Bra028304.1-P	Field mustard	cytosol	80.61	60.77
Bra019151.1-P	Field mustard	cytosol	79.59	60.47
Bra029119.1-P	Field mustard	cytosol	79.59	60.0
AT4G25590.1	Thale cress	cytosol	82.65	59.12
GSMUA_AchrUn_...	Banana	cytosol	79.59	59.09
Bra010456.1-P	Field mustard	cytosol	81.63	57.55
PGSC0003DMT400037205	Potato	cytosol	79.59	56.93
KRH35309	Soybean	cytosol	79.59	56.93
KRG91521	Soybean	cytosol	79.59	56.93
KRH41156	Soybean	cytosol	73.47	55.38
PGSC0003DMT400076911	Potato	cytosol	77.55	55.07
AT5G52360.1	Thale cress	cytosol	76.53	54.74
Solyc06g035980.2.1	Tomato	cytosol	76.53	54.74
KRH77527	Soybean	cytosol	76.53	54.74
GSMUA_Achr10P...	Banana	cytosol	73.47	54.55
GSMUA_Achr6P15320_001	Banana	cytosol	73.47	54.55
Solyc03g025750.2.1	Tomato	cytosol	75.51	54.01
KRH27939	Soybean	cytosol	75.51	54.01
GSMUA_Achr6P15330_001	Banana	cytosol, plastid	48.98	53.33
Bra013901.1-P	Field mustard	cytosol	81.63	52.63
GSMUA_Achr7P00900_001	Banana	cytosol	65.31	48.48
GSMUA_Achr5P24750_001	Banana	cytosol	53.06	46.85
CDX92721	Canola	mitochondrion	79.59	43.58
GSMUA_Achr2P13120_001	Banana	cytosol	64.29	43.45
GSMUA_Achr2P17320_001	Banana	cytosol	64.29	43.45
GSMUA_Achr5P18890_001	Banana	cytosol, plastid	63.27	43.36
CDY54088	Canola	cytosol	42.86	43.3
GSMUA_Achr6P33310_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	72.45	42.77
GSMUA_Achr11P...	Banana	cytosol, plastid	62.24	42.66
KRH59855	Soybean	endoplasmic reticulum, extracellular	73.47	42.6
GSMUA_Achr9P04050_001	Banana	endoplasmic reticulum, extracellular	71.43	42.17
GSMUA_Achr5P12270_001	Banana	plastid, vacuole	84.69	41.29
GSMUA_Achr10P...	Banana	endoplasmic reticulum, vacuole	75.51	40.0
GSMUA_Achr2P11510_001	Banana	cytosol	90.82	39.04
CDY72027	Canola	cytosol	41.84	38.32
CDY50194	Canola	cytosol	79.59	36.62
GSMUA_Achr2P18590_001	Banana	cytosol	83.67	36.12
GSMUA_Achr11P...	Banana	cytosol	62.24	36.09
GSMUA_Achr7P16650_001	Banana	cytosol	34.69	35.42
GSMUA_AchrUn_...	Banana	extracellular	30.61	34.48
GSMUA_Achr10P...	Banana	endoplasmic reticulum	73.47	33.18
GSMUA_Achr1P09160_001	Banana	cytosol	62.24	31.28
GSMUA_Achr2P16220_001	Banana	cytosol	76.53	26.98

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin	GO:GO:0003674
GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042
EnsemblPlantsGene:GSMUA_Achr4G29400_001	EnsemblPlants:GSMUA_Achr4P29400_001	EnsemblPlants:GSMUA_Achr4T29400_001	InterPro:IPR002108	InterPro:IPR029006	UniProt:M0ST52
PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF33	SMART:SM00102	SUPFAM:SSF55753
UniParc:UPI000296FC02	:	:	:	:	:

Description

Actin-depolymerizing factor [Source:GMGC_GENE;Acc:GSMUA_Achr4G29400_001]

Coordinates

chr4:+:27376516..27377059

Molecular Weight (calculated)

11260.2 Da

IEP (calculated)

4.391

GRAVY (calculated)

-0.545

Length

98 amino acids

Sequence
(BLAST)

1: MVEKLGQPEQ SYDDLAASLP PDDCRYAVFD LDFITDENCQ KSKIFFISWS PDTSRVRNKM LYASSKDRFK RELDGIQVDL QATDPSEMSF DIIKGRAL

Best Arabidopsis Sequence Match ( AT1G01750.1 )
(BLAST)

001: MANSASGMHV SDECKLKFLE LKAKRNYRFI VFKIDEKAQQ VMIDKLGNPE ETYEDFTRSI PEDECRYAVY DYDFTTPENC QKSKIFFIAW SPDTSRVRSK
101: MLYASSKDRF KRELDGIQVE LQATDPSEMS LDIIKGRVNL

Arabidopsis Description

ADF11actin depolymerizing factor 11 [Source:TAIR;Acc:AT1G01750]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.